PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00118_0070
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family HB-other
Protein Properties Length: 391aa    MW: 41847.4 Da    PI: 10.1426
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00118_0070genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox31.62.7e-103553872254
                    SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
       Homeobox  22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     +yp+ +e++ LA+++gL+ +qV++WF N+R +
  kfl00118_0070 355 WPYPTDDEKQALARQTGLSMKQVSNWFINQRKR 387
                    59*****************************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007112.843328391IPR001356Homeobox domain
CDDcd000867.81E-15330391No hitNo description
SuperFamilySSF466891.58E-16330390IPR009057Homeodomain-like
SMARTSM003891.4E-7330391IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.607.5E-24335390IPR009057Homeodomain-like
PfamPF059204.1E-17348387IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009727Biological Processdetection of ethylene stimulus
GO:0071369Biological Processcellular response to ethylene stimulus
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    Send to blast
MEEESISAKP GLQAGSLPPD LPLLVHDIEC NQSYPKLIAA HVACVQMDTS SPRLYQLELD  60
LAAAHGSIGA EGRAERAAPG LQAAAPEVDA FMAECLAQLG RLKAALESHI SAALRSCEVL  120
EQRLVDALGH RARPPATLSP QVSSLRSSPP QPAADRSRAV GRSRKAADLQ GPLLPASLRK  180
VPSSTGPGAR PSASPHPAFP ALLASTRPLG EIDGTSGLTG HPRGDPTGRV PPAAGRDVGF  240
SRSREPASDL GGGGLSTSTA MLVRRCLQRD AQLGRAEWAT ESGPVGASSE GRGARGPEPA  300
VAASMAKELR HKLKKQYSET LAEVHKEILR KRQAGRLPGD QGHLLKDWWR RHESWPYPTD  360
DEKQALARQT GLSMKQVSNW FINQRKRNWK H
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1I3D70.0A0A1Y1I3D7_KLENI; Homeobox protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP16717148
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32040.16e-33KNOTTED1-like homeobox gene 5