PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

3D Structure |

Gene Ontology |

Basic Information? help Back to Top

TF ID

kfl00115_0030

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

Protein Properties

Length: 1088aa MW: 117937 Da PI: 6.4842

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00115_0030	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	44.1	3.8e-14	933	1023	1	90
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k+lt sd++ +gr+v+pk ae h gk es tlt++d +g++W++++++ +++s++yvl+ +F ++ gL gD + F++ + kfl00115_0030 933 FEKALTISDTNPLGRIVMPKVQAEGHlprmAGK--ESCTLTVTDADGKTWQLRYSVwlNNRSRMYVLE-HAGDFLQSRGLAPGDLLAFYRA--D 1021 89************************87555..5669***********87789999999999.899***************54..3 PP EE CS B3 89 ef 90 ++ kfl00115_0030 1022 DR 1023 44 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04161	1.0E-44	10	200	IPR007290	Arv1 protein
SuperFamily	SSF46689	3.64E-7	471	530	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	8.6E-8	472	530	IPR009057	Homeodomain-like
Gene3D	G3DSA:2.40.330.10	7.2E-21	930	1034	IPR015300	DNA-binding pseudobarrel domain
SuperFamily	SSF101936	2.35E-16	930	1025	IPR015300	DNA-binding pseudobarrel domain
CDD	cd10017	1.27E-17	932	1019	No hit	No description
SMART	SM01019	8.6E-8	933	1031	IPR003340	B3 DNA binding domain
Pfam	PF02362	9.7E-11	933	1023	IPR003340	B3 DNA binding domain
PROSITE profile	PS50863	9.939	933	1033	IPR003340	B3 DNA binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006665	Biological Process	sphingolipid metabolic process
GO:0016125	Biological Process	sterol metabolic process
GO:0005783	Cellular Component	endoplasmic reticulum
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1088 aa Download sequence Send to blast
MADESAVALR CIECSNVVPS LYQEYSPGNI KLTRCDRCHC YADEYVEHEM MVVWIDLVLH 60 RERAYRHLLF NVPLQHRQNL KGYLWKSTIA ILLLDSGKRW LHDHKATTIF DGPIWPTLSS 120 FFRCFLTELV LGTLPYTAVI LLLVHHWKLA PKRRWLDVLL AVHVSSFFKL FAIPMLIWRF 180 ERAMVVLLDF FVLTSNVTAL KVLLETSYPC AGTLRVLRDP CKLESMTSEG TVQAPAPNPS 240 NIPWENVLAE LEGGGEGEAF KGLDRLASLD FVSDLLSSEG FENFKPPGHE ERKLTRLASL 300 ELLTELFDWD GGLAEGQAAP LEGASGVSND WTDEGLLAAL GDTGEGAAHV IEGESTGGSG 360 EGGKRSLESG WASEIGGQDG SPDFAPPSAD QQLQWEAKMG KAPNAGSQAQ AWKRSDAAYY 420 ALSARPPFQS AVSRRSSGTR QTASSGSRKI GRPMLPSTPP PLDMQDPLAG PRMRFTPQQQ 480 KALYDFGESI KWATPGLEND PRAQQMCELI GMGMRQLKKW ISNHRPKEHK PPVSHPPWSI 540 PAGLITDGSH PPLSRAALAS LAAAQAAVMG QPFVGPFVPP PTVQGPFHPP APGQWPQGIP 600 PAAFVPPFGA GMQLPFGGVI GTVVDVPYQV NGPLSFGGGS GSSIGSQGSQ NEGGLASEAS 660 MRGDTGLAVD NVKKVLRRKL KDFEPEKVRK LFDLCMEYRQ KRSLLKAGGT LLEGLDPPTK 720 RQRTEAPSPL PPVLAPPTPS SAPILSPNRR TFPSESGDDS ELTECEKPLT DFNPLILEPV 780 QILNPSEGKQ TPLENGAPSQ AVWDGSGGRT LSTLPSFPSI DLSHWGIEAG ITSVNADQPA 840 GTAGESQQLT SAMAGFANQS SQERQTPSHQ VGAHSPQSIP ELVNSFPNPS RNASGDFRPS 900 FGGERRHSAG RMERTESQER KVTAELPGCT YLFEKALTIS DTNPLGRIVM PKVQAEGHLP 960 RMAGKESCTL TVTDADGKTW QLRYSVWLNN RSRMYVLEHA GDFLQSRGLA PGDLLAFYRA 1020 DDRRLIILDK KQNDSPPAQP GSDGGAAASG SGARRLPSGH SGAFSAAEIT DSQKVEVDPL 1080 LLHELKSF

Sequence ? help Back to Top

Protein Sequence Length: 1088 aa Download sequence Send to blast

MADESAVALR CIECSNVVPS LYQEYSPGNI KLTRCDRCHC YADEYVEHEM MVVWIDLVLH  60
RERAYRHLLF NVPLQHRQNL KGYLWKSTIA ILLLDSGKRW LHDHKATTIF DGPIWPTLSS  120
FFRCFLTELV LGTLPYTAVI LLLVHHWKLA PKRRWLDVLL AVHVSSFFKL FAIPMLIWRF  180
ERAMVVLLDF FVLTSNVTAL KVLLETSYPC AGTLRVLRDP CKLESMTSEG TVQAPAPNPS  240
NIPWENVLAE LEGGGEGEAF KGLDRLASLD FVSDLLSSEG FENFKPPGHE ERKLTRLASL  300
ELLTELFDWD GGLAEGQAAP LEGASGVSND WTDEGLLAAL GDTGEGAAHV IEGESTGGSG  360
EGGKRSLESG WASEIGGQDG SPDFAPPSAD QQLQWEAKMG KAPNAGSQAQ AWKRSDAAYY  420
ALSARPPFQS AVSRRSSGTR QTASSGSRKI GRPMLPSTPP PLDMQDPLAG PRMRFTPQQQ  480
KALYDFGESI KWATPGLEND PRAQQMCELI GMGMRQLKKW ISNHRPKEHK PPVSHPPWSI  540
PAGLITDGSH PPLSRAALAS LAAAQAAVMG QPFVGPFVPP PTVQGPFHPP APGQWPQGIP  600
PAAFVPPFGA GMQLPFGGVI GTVVDVPYQV NGPLSFGGGS GSSIGSQGSQ NEGGLASEAS  660
MRGDTGLAVD NVKKVLRRKL KDFEPEKVRK LFDLCMEYRQ KRSLLKAGGT LLEGLDPPTK  720
RQRTEAPSPL PPVLAPPTPS SAPILSPNRR TFPSESGDDS ELTECEKPLT DFNPLILEPV  780
QILNPSEGKQ TPLENGAPSQ AVWDGSGGRT LSTLPSFPSI DLSHWGIEAG ITSVNADQPA  840
GTAGESQQLT SAMAGFANQS SQERQTPSHQ VGAHSPQSIP ELVNSFPNPS RNASGDFRPS  900
FGGERRHSAG RMERTESQER KVTAELPGCT YLFEKALTIS DTNPLGRIVM PKVQAEGHLP  960
RMAGKESCTL TVTDADGKTW QLRYSVWLNN RSRMYVLEHA GDFLQSRGLA PGDLLAFYRA  1020
DDRRLIILDK KQNDSPPAQP GSDGGAAASG SGARRLPSGH SGAFSAAEIT DSQKVEVDPL  1080
LLHELKSF

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j9b_A	2e-19	931	1019	3	92	B3 domain-containing transcription factor FUS3
6j9b_D	2e-19	931	1019	3	92	B3 domain-containing transcription factor FUS3

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1HXQ3	0.0	A0A1Y1HXQ3_KLENI; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	8e-20	B3 family protein