PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

kfl00079_0440

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

bZIP

Protein Properties

Length: 402aa MW: 44099.2 Da PI: 6.5293

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00079_0440	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.7	8.1e-11	111	146	3	38
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeL 38 ++k rr+++NReAAr+sR+RKka++++Le L kfl00079_0440 111 PDKTLRRLAQNREAARKSRLRKKAYVQQLESSRIRL 146 68999************************9743333 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	7.2E-9	105	156	No hit	No description
SMART	SM00338	5.6E-6	109	208	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.094	111	155	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	7.8E-8	111	152	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	5.63E-7	113	157	No hit	No description
CDD	cd14708	4.29E-21	113	162	No hit	No description
PROSITE pattern	PS00036	0	116	131	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	1.8E-33	203	277	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009410	Biological Process	response to xenobiotic stimulus
GO:0045892	Biological Process	negative regulation of transcription, DNA-templated
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0005737	Cellular Component	cytoplasm
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence Send to blast
MASTLTPALA AGINSEVFSG KSQKTSDMSA PRDNNGAYDL ADLDGTPMNF GIAEDDDVGG 60 RGNGANGGAW NDTPMSPRSP SSDGGDMDEY KDQGSPSNKR PGDSDKKSEG PDKTLRRLAQ 120 NREAARKSRL RKKAYVQQLE SSRIRLQQLE QELQRARQQG VYHGDGAAGG GGTLPGLNSN 180 PNPGAAQFDL EYGRWVEEHS RQTSELRTAV NQRSTDDELR TLVDQCLAHY DELFKLKSQA 240 AKMDVFHLVS GMWKTPAERC FMWMGGFRPS EMLKIIIPQV EPLTEQQLMA ICNLQQSSQQ 300 AEDALSQGME SLQQSLADTL SAGNMSASSN VANYMGQMAM AMGKLGTLES FVRQADSLRQ 360 QSLQQMHRTL NIRQSAKGFL AMADYHARLR ALSSLWAARP RD

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence Send to blast

MASTLTPALA AGINSEVFSG KSQKTSDMSA PRDNNGAYDL ADLDGTPMNF GIAEDDDVGG  60
RGNGANGGAW NDTPMSPRSP SSDGGDMDEY KDQGSPSNKR PGDSDKKSEG PDKTLRRLAQ  120
NREAARKSRL RKKAYVQQLE SSRIRLQQLE QELQRARQQG VYHGDGAAGG GGTLPGLNSN  180
PNPGAAQFDL EYGRWVEEHS RQTSELRTAV NQRSTDDELR TLVDQCLAHY DELFKLKSQA  240
AKMDVFHLVS GMWKTPAERC FMWMGGFRPS EMLKIIIPQV EPLTEQQLMA ICNLQQSSQQ  300
AEDALSQGME SLQQSLADTL SAGNMSASSN VANYMGQMAM AMGKLGTLES FVRQADSLRQ  360
QSLQQMHRTL NIRQSAKGFL AMADYHARLR ALSSLWAARP RD

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
UniProt	Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00492	DAP	Transfer from AT5G06950	Download

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002980439.2	1e-156	transcription factor TGA2.3 isoform X2
Refseq	XP_024529114.1	1e-156	transcription factor TGA2.3
Refseq	XP_024536795.1	1e-156	transcription factor TGA2.3 isoform X1
Refseq	XP_024544912.1	1e-156	transcription factor TGA2.3 isoform X2
Swissprot	O24160	1e-140	TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
Swissprot	P23923	1e-140	HBP1B_WHEAT; Transcription factor HBP-1b(c38)
TrEMBL	A0A1Y1HW44	0.0	A0A1Y1HW44_KLENI; BZIP transcription factor
STRING	EFJ22847	1e-159	(Selaginella moellendorffii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP722	16	67

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06950.4	1e-111	bZIP family protein

Publications ? help Back to Top
Tabata T,Nakayama T,Mikami K,Iwabuchi M HBP-1a and HBP-1b: leucine zipper-type transcription factors of wheat. EMBO J., 1991. 10(6): p. 1459-67 [PMID:2026143]