|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
evm_27.model.AmTr_v1.0_scaffold02859.1 |
Common Name | AMTR_s02859p00001300, LOC18436530 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
|
Family |
NAC |
Protein Properties |
Length: 310aa MW: 35285.6 Da PI: 8.4202 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm_27.model.AmTr_v1.0_scaffold02859.1 | genome | TAGP | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 68.8 | 1.5e-21 | 7 | 87 | 57 | 128 |
NAM 57 ewyfFskrdkkyatgkrknratk........sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkge 117
+ +fF++ +k+y+tg+rk+r+++ + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+e
evm_27.model.AmTr_v1.0_scaffold02859.1 7 SRHFFHRPSKAYTTGTRKRRKIQtecdlqggETRWHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKHRKPE 76
569*****************73334555544778************.999***********5547999999 PP
NAM 118 ktdWvmheyrl 128
kt+Wvmh+y+l
evm_27.model.AmTr_v1.0_scaffold02859.1 77 KTNWVMHQYHL 87
*********98 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 310 aa
Download sequence Send
to blast |
VTRDGLSRHF FHRPSKAYTT GTRKRRKIQT ECDLQGGETR WHKTGKTRPV MVNGKQKGCK 60 KILVLYTNFG KHRKPEKTNW VMHQYHLGQH EEEREGELVV SKIFYQTQPR QCSWSDKSVE 120 RESVGVERER AKASCQASSS ELAIEHVTKE GGHRDDMVSG FVAMDVQQMK ANDHFSFAPF 180 RKSFDEVGMC ESSNVTESST SLCNPGSCEE RESSSGLSTT MAQAHMGHQQ QVAYHISRPS 240 NPISAIISPP PLHHQTTLVM DDSFHVSRLL FQGDKFQHQQ QQHKIAERPG SHKISLDELF 300 MDCTPSDMKE
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription activator involved in xylem formation (PubMed:25265867, PubMed:25535195). Promotes the expression of the secondary wall-associated transcription factor MYB46 (PubMed:25265867). Functions upstream of NAC030/VND7, a master switch of xylem vessel differentiation (PubMed:25265867, PubMed:25535195). Acts as upstream regulator of NAC101/VND6 and LBD30/ASL19 (PubMed:25535195). {ECO:0000269|PubMed:25265867, ECO:0000269|PubMed:25535195}. |