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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
evm_27.model.AmTr_v1.0_scaffold00160.11 |
Common Name | AMTR_s00160p00053540 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
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Family |
Dof |
Protein Properties |
Length: 229aa MW: 25286.2 Da PI: 5.6585 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm_27.model.AmTr_v1.0_scaffold00160.11 | genome | TAGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 97.5 | 9.3e-31 | 32 | 87 | 5 | 60 |
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
lkcprCds +tkf yynnys+ qPr++C++C r Wt+GG+lrnvPvG+++rk++k
evm_27.model.AmTr_v1.0_scaffold00160.11 32 PLKCPRCDSFDTKFWYYNNYSILQPRHYCRTCCRSWTNGGTLRNVPVGSSSRKRNK 87
689*************************************************9876 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 229 aa
Download sequence Send
to blast |
MEQEIGDAAH LLRSSSLFLQ DPEEKSSYKK VPLKCPRCDS FDTKFWYYNN YSILQPRHYC 60 RTCCRSWTNG GTLRNVPVGS SSRKRNKPAE MTMNTTSAQL ETILSQPAPT TYSIAPPAGF 120 GSSFYSFEQG NGYDGTSDQG MLPQQFMGSE SQSHAMNFVG QFGSGFAEQG LPQLGAGLDG 180 MMQYEPTSGW RGERMPAWFD EGVIEKGPSP DSGSLTMPLP VTHYFTYP*
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Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP38 | 17 | 445 |