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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm_27.model.AmTr_v1.0_scaffold00160.10 |
Common Name | AMTR_s00160p00046100, LOC18439161 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
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Family |
Dof |
Protein Properties |
Length: 322aa MW: 34837.4 Da PI: 7.8741 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm_27.model.AmTr_v1.0_scaffold00160.10 | genome | TAGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 124.6 | 3.1e-39 | 31 | 91 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
+++alkcprCds+ntkfCyynnyslsqPr+fCk+C+ryWt+GG+lrnvPvGg++rknk+ +
evm_27.model.AmTr_v1.0_scaffold00160.10 31 PDQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKTCKRYWTRGGTLRNVPVGGSSRKNKRIK 91
6899******************************************************875 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 322 aa
Download sequence Send
to blast |
MVSSSSSSLM DHRHSQLQQQ TGGAGGLKPP PDQALKCPRC DSSNTKFCYY NNYSLSQPRH 60 FCKTCKRYWT RGGTLRNVPV GGSSRKNKRI KRGGPSSSTT SSENQSSGNN NIGSQSVDPP 120 TSSSPATDLA CTLQGSVGSN HPIFYVLPSS AADVNLGFPT SSSLTSGSEF LHLPQFSSLS 180 SYLQDHQVAS FNPAHQVQEA PLSLLPDLSR FSSPLIEGPM DAPWKQQQQK LSLSLKDGHG 240 HESLQFLFPF EEGSRRAESL RAGVKLEEDN ASRLGQMDWQ MPSANAFENG GNDPSPLYWN 300 QSTTTSWPDI SSYSSSVTPL I*
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Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP38 | 17 | 445 |