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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm_27.model.AmTr_v1.0_scaffold00139.15 |
Common Name | AMTR_s00139p00079430, LOC18421779 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
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Family |
MYB |
Protein Properties |
Length: 260aa MW: 28789.3 Da PI: 7.9411 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm_27.model.AmTr_v1.0_scaffold00139.15 | genome | TAGP | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 53.9 | 4.2e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd++l+ +++ +G g+W++ ++ g+ R++k+c++rw +yl
evm_27.model.AmTr_v1.0_scaffold00139.15 14 KGAWTKEEDQRLIAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 61
79******************************99************97 PP
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2 | Myb_DNA-binding | 60.1 | 4.8e-19 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg++T+eEdel+++++ +lG++ W++Ia +++ gRt++++k++w+++
evm_27.model.AmTr_v1.0_scaffold00139.15 67 RGNFTEEEDELIIKLHSLLGNK-WSLIAGRLP-GRTDNEIKNYWNTH 111
89********************.*********.************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009751 | Biological Process | response to salicylic acid |
GO:0009753 | Biological Process | response to jasmonic acid |
GO:0010224 | Biological Process | response to UV-B |
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
GO:1903086 | Biological Process | negative regulation of sinapate ester biosynthetic process |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 260 aa
Download sequence Send
to blast |
MGRSPCCEKA HTNKGAWTKE EDQRLIAYIR AHGEGCWRSL PKAAGLLRCG KSCRLRWINY 60 LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGRLPGRT DNEIKNYWNT HIKRKLLSRG 120 VDPHTHRPLH EPYPENSESP RQASIGHIPQ QSTSNSDKNV GGDRQRELAE EGHSSSGASE 180 GEIPDLNLDL SISLPFPSMP SPTTIAGTTE EGTSGAALSE QQMGSVVCLC CHLSLQSSTD 240 CRCRTLHSSQ PVWFLSRPS*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. {ECO:0000305}. |
Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP5 | 17 | 1784 |