|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
evm_27.model.AmTr_v1.0_scaffold00119.78 |
Common Name | AMTR_s00119p00099150, LOC18425206 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
|
Family |
Dof |
Protein Properties |
Length: 516aa MW: 55531 Da PI: 6.5044 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm_27.model.AmTr_v1.0_scaffold00119.78 | genome | TAGP | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 125.2 | 2e-39 | 117 | 177 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
++k l+cprC+s +tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s
evm_27.model.AmTr_v1.0_scaffold00119.78 117 PDKVLPCPRCNSLDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKHSA 177
78999*****************************************************986 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 516 aa
Download sequence Send
to blast |
MLEVKDPAIK LFGKTIPLLE NNFLSDSIDK SDDIQATSDE KETCQENNEA SGDKAGANTE 60 DPASPNDLKE CKEEPQNSNH EINKATPNPK DSKPLSTEED QTEIEGGGSQ EKTLKKPDKV 120 LPCPRCNSLD TKFCYYNNYN VNQPRHFCKN CQRYWTAGGT MRNVPVGAGR RKNKHSASHY 180 RHIMMSENLA KPLIEPQETN HHKVISCGVP PHTRPLKTGG TVLKFGPDAP LCESMETVLN 240 LGEQAVPKRE KVSENGEELS CGSSTVTAPT SVERELQENM VEKGGLVGCC KGGVGAPHLQ 300 CFPGGASPWP YPWAPNWTGV AAMAATSPGG RCSSEVVYGG PEHGGGSSGP VQWTTHPAIV 360 APPPPFCGPT VPFPFVPGSY WGCVPTWAGG TWPIPWVNSS YGNGLSPSST SSGNNSPTLG 420 KHSRDAPSQG EEKPEKSLWV PKTLRIDDPD EAAKSSIWAT LGIKHDSLEP IRKGGIFKAF 480 QPKVEGKDRS SETVQVLQAN PAALSRSHTF QESST*
|
Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP38 | 17 | 445 |