 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
evm_27.model.AmTr_v1.0_scaffold00111.88 |
Common Name | AMTR_s00111p00113030, LOC18428270 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
|
Family |
ERF |
Protein Properties |
Length: 336aa MW: 36657 Da PI: 6.8881 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm_27.model.AmTr_v1.0_scaffold00111.88 | genome | TAGP | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 66.2 | 6.6e-21 | 142 | 192 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrdp+++ +r++lg+f+ta eAa+a+++a+ +l+g
evm_27.model.AmTr_v1.0_scaffold00111.88 142 HYRGVRQRP-WGKFAAEIRDPNKQ--GARVWLGTFDTAIEAARAYDQAAFRLRG 192
8********.**********9544..4*************************98 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009409 | Biological Process | response to cold |
GO:0010200 | Biological Process | response to chitin |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 336 aa
Download sequence Send
to blast |
MEAFQSSSVL DLIREHLLGD FAIDELFEAL DSNKTNLSLE IGSESTVHEE KTSGLEDMTS 60 KSRINKEKTS NLTPLITESR ETGLPPPHNS SPSISRRPSL TLALPPAQPL DLTPTGRNTR 120 PDKFSGEKSA GITGSSSDSK KHYRGVRQRP WGKFAAEIRD PNKQGARVWL GTFDTAIEAA 180 RAYDQAAFRL RGSRAILNFP LEAGRNPNGN PKGVAEEAAI TSQNPNGASK GAQIVAGEAS 240 VAGRNPNGEE RKRMREETVH NTCLKVPKME SDESIHNMCM KRSPENWLET RPESGFTAPP 300 LTPSNWWDCG ELKGIFEVPP LSPHSPFGYS QVLVS*
|
Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP6 | 16 | 1718 |