PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm_27.model.AmTr_v1.0_scaffold00061.95 | ||||||||
Common Name | AMTR_s00061p00118690 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
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Family | bZIP | ||||||||
Protein Properties | Length: 148aa MW: 16222 Da PI: 10.1013 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 42.9 | 1.1e-13 | 101 | 145 | 5 | 49 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 ++ rk+kNRe+A rsR+RK+a++ +L v+eL++eN +Lk+el evm_27.model.AmTr_v1.0_scaffold00061.95 101 RKRQRKIKNRESAARSRARKQAYTCQLDISVAELKEENARLKNEL 145 456689************************************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 5.8E-12 | 96 | 145 | No hit | No description |
SMART | SM00338 | 0.003 | 97 | 145 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.783 | 99 | 145 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.0E-11 | 100 | 145 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 2.49E-17 | 101 | 142 | No hit | No description |
SuperFamily | SSF57959 | 3.88E-9 | 101 | 145 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 105 | 119 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 148 aa Download sequence Send to blast |
MEYTQTNGSS PTTNGVQTAA SLSIWQQSNP SNNLMLPFEQ GSYGAGIGGS HSHGGGVDIS 60 NVIYFNNVNG NGVLGNVVRN GGQVPRRRRN VMEALEELEE RKRQRKIKNR ESAARSRARK 120 QAYTCQLDIS VAELKEENAR LKNELVF* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006857619.2 | 1e-104 | protein ABSCISIC ACID-INSENSITIVE 5 | ||||
TrEMBL | U5D0G9 | 1e-103 | U5D0G9_AMBTC; Uncharacterized protein | ||||
STRING | ERN19086 | 1e-104 | (Amborella trichopoda) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP10063 | 7 | 11 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 1e-13 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | evm_27.model.AmTr_v1.0_scaffold00061.95 |
Publications ? help Back to Top | |||
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