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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm_27.model.AmTr_v1.0_scaffold00059.249 |
Common Name | AMTR_s00059p00213350, LOC18446049 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
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Family |
Dof |
Protein Properties |
Length: 202aa MW: 22036.7 Da PI: 8.0652 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm_27.model.AmTr_v1.0_scaffold00059.249 | genome | TAGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 123.7 | 5.9e-39 | 22 | 82 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
++++l+cprCdstntkfCyynny+lsqPr+fCk+CrryWtkGGalrn+P+Gg++rk k+s
evm_27.model.AmTr_v1.0_scaffold00059.249 22 PHEHLRCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPIGGATRKTTKRS 82
67899***************************************************98876 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 202 aa
Download sequence Send
to blast |
MDIHHQHQQQ NQVTKPQPLD QPHEHLRCPR CDSTNTKFCY YNNYNLSQPR HFCKNCRRYW 60 TKGGALRNIP IGGATRKTTK RSSSKPKPPS KSVILPEMTP SMPEISATTA ADMFETSGEI 120 TGTFSSLLAA NGGFGGLGEP WWNGGFQRVG GFEEGGLMQG SFVRGGIGSL QEWLGGGICE 180 PWMVETEGLD ANCWSAGSGL Q*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. {ECO:0000250}. |
Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP38 | 17 | 445 |