 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
evm_27.model.AmTr_v1.0_scaffold00057.42 |
| Common Name | AMTR_s00057p00069720 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
|
| Family |
MYB_related |
| Protein Properties |
Length: 260aa MW: 29949.2 Da PI: 4.6378 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm_27.model.AmTr_v1.0_scaffold00057.42 | genome | TAGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 28.5 | 3.6e-09 | 4 | 28 | 22 | 48 |
T-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 22 gtWktIartmgkgRtlkqcksrwqkyl 48
+ W++Ia++++ gRt++++k++w+++l
evm_27.model.AmTr_v1.0_scaffold00057.42 4 E-WSLIAAYLP-GRTDNEIKNYWNSHL 28
4.*********.************986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 260 aa
Download sequence Send
to blast |
MRKEWSLIAA YLPGRTDNEI KNYWNSHLSR RVDTWRRLNA SVPVLFHGKK FNGGGKRKGG 60
RGNKVGTRSK VGDFRERREK EGLNGFVSGE NEERGVRDPS YEGRKNSTLL TKSDEGLKDI 120
EGANREMGMV KHGQNEERCR EMGVVERESA ILSESLGLGL VGDVEREGEM MVSGDEGESL 180
LDLCNETLEL SEERELRVVS EDTERVRKML GLNQKECDMW SFDGDLGWGW DWDWDWDWDW 240
DWETGKMMGD EREEVFSWL*
|
| Orthologous Group
? help Back to Top |
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Representative plant | OGRP5 | 17 | 1784 |
