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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm_27.model.AmTr_v1.0_scaffold00049.47 |
Common Name | AMTR_s00049p00074250, LOC18441863 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
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Family |
MYB |
Protein Properties |
Length: 257aa MW: 29432.2 Da PI: 5.7272 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm_27.model.AmTr_v1.0_scaffold00049.47 | genome | TAGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 45 | 2.5e-14 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+W +eEd++l + + G ++W+++++ g+ R++k+c++rw +yl
evm_27.model.AmTr_v1.0_scaffold00049.47 14 RGPWNAEEDKKLMNFILNNGQNCWRLVPKLAGLLRCGKSCRLRWTNYL 61
89******************************99************97 PP
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2 | Myb_DNA-binding | 47.4 | 4.5e-15 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+ ++ E+ ++++++ +lG++ W++Ia+ ++ gRt++++k++w++
evm_27.model.AmTr_v1.0_scaffold00049.47 67 RGALSEFEENKIIELHSRLGNR-WSRIASQLP-GRTDNEIKNHWNT 110
6677888***************.*********.***********97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 257 aa
Download sequence Send
to blast |
MGRQPCCDKV GLKRGPWNAE EDKKLMNFIL NNGQNCWRLV PKLAGLLRCG KSCRLRWTNY 60 LRPDLKRGAL SEFEENKIIE LHSRLGNRWS RIASQLPGRT DNEIKNHWNT RIKKKLKLLG 120 LDPDTHKPNE TGCTKIEEET HKEEEKIQSK SEASLSKVDD TASFSPSYGG LWESWGVEEL 180 MDPVLIEPEG LVVNQEESHG QSLEQGSSAS NSCISSATLE EDMKRFWGEE CFLGERMGSF 240 YEFEEQQHCL DRFFFS*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that acts as positive regulator of abscisic acid (ABA) signaling in response to salt stress. Acts as negative regulator ABI1, ABI2 and PP2CA, which are protein phosphatases 2C acting as negative regulator of ABA signaling. Binds to the DNA specific sequence and core element 5'-ACGT-3' found in the promoters of ABI1 and PP2CA to negatively regulate their expression during ABA-dependent salt stress response. {ECO:0000269|PubMed:23660402}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by salt stress, drought stress and abscisic acid (ABA). Down-regulated by salicylic acid (SA) methyl jasmonate (JA). {ECO:0000269|PubMed:23660402}. |
Orthologous Group
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP5 | 17 | 1784 |