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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
evm_27.model.AmTr_v1.0_scaffold00048.218 |
Common Name | AMTR_s00048p00225900, LOC18443991 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
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Family |
Trihelix |
Protein Properties |
Length: 308aa MW: 36424.9 Da PI: 8.4495 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm_27.model.AmTr_v1.0_scaffold00048.218 | genome | TAGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 84.1 | 1.8e-26 | 56 | 137 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69
+W++qe+++ i++r e+e+++ ++k++k+lW++v++km+erg++rsp+qCk+kw+nl +ryk ++++
evm_27.model.AmTr_v1.0_scaffold00048.218 56 QWSHQETRDFIAIRAELERDFTQTKRNKTLWQAVASKMKERGYRRSPEQCKCKWKNLVNRYKGKETSDP 124
7**************************************************************999998 PP
trihelix 70 krtsessstcpyfdqle 86
+ s ++cp++++l+
evm_27.model.AmTr_v1.0_scaffold00048.218 125 E----SGRQCPFYEELQ 137
7....4678******98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 308 aa
Download sequence Send
to blast |
MMIGSAESEA LGMSIMSSLP LQLNQAAAMA REAPISIRDP VNSSGLWSKK DDRVPQWSHQ 60 ETRDFIAIRA ELERDFTQTK RNKTLWQAVA SKMKERGYRR SPEQCKCKWK NLVNRYKGKE 120 TSDPESGRQC PFYEELQAIF TERSKSLNRM LLESELGGSA SKNKMKRPLP ERSSDEFTDD 180 EEDDEEESED DRTATKGKKR KLERDRNKVG ADKSRANGIN EVLQEFFQQQ QRMEMQWREM 240 AERRAQERRM FEQEWRQSME KLERERLMLE QSYREREEQR RMREESRAEK RDQLLTTLLN 300 KLIHDGL*
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