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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
evm_27.model.AmTr_v1.0_scaffold00044.3 |
Common Name | AMTR_s00044p00016810 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
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Family |
Trihelix |
Protein Properties |
Length: 291aa MW: 33288.4 Da PI: 8.9342 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm_27.model.AmTr_v1.0_scaffold00044.3 | genome | TAGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 55.8 | 1.2e-17 | 33 | 123 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrg......klkkplWeevskkmrergferspkqCkekwenlnkrykkike 66
Wt +e+++Li+a+r ++er +g k ++ +W++v +++++ + rs++qC++kw+nl ++ykk+++
evm_27.model.AmTr_v1.0_scaffold00044.3 33 WTLHETMVLIRAKRMDDERRMKGgdrernKTAELRWKWVENYCWQNDCLRSQNQCNDKWDNLLRDYKKVRD 103
**************8888877543333337999************************************** PP
trihelix 67 gekkrtsessstcpyfdqle 86
e +r++e p + q+e
evm_27.model.AmTr_v1.0_scaffold00044.3 104 YEARRAEEPGGGAPSYWQIE 123
****9877666777777765 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 291 aa
Download sequence Send
to blast |
MGDPNTAVVV AQEQSGPSSS SPNAPREYRK GNWTLHETMV LIRAKRMDDE RRMKGGDRER 60 NKTAELRWKW VENYCWQNDC LRSQNQCNDK WDNLLRDYKK VRDYEARRAE EPGGGAPSYW 120 QIEKQERKEK NLPSNMVAEV FEALNEVVNK RCNPNVQRAL PPIQQQLPPP PPPPAPPPPP 180 PPSQPFSGDI YESSDSDHTE KTDSEAKRRK LKNLGPSVVR SASMLAQTML TCEEKREKRH 240 RDIIEIEEKK LQMEERRTEM NRQGFSGLVS SVNNLSNAIL ALVSNRNDGK *
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