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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm_27.model.AmTr_v1.0_scaffold00044.181 |
Common Name | AMTR_s00044p00165760, LOC18445546 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
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Family |
Nin-like |
Protein Properties |
Length: 339aa MW: 38612.5 Da PI: 10.4974 |
Description |
Nin-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm_27.model.AmTr_v1.0_scaffold00044.181 | genome | TAGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | RWP-RK | 81.2 | 1e-25 | 211 | 260 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
++i l+dlsk+F+ p+++A+++L+v+lTvLKr+CR++GI+RWPhRkiksl
evm_27.model.AmTr_v1.0_scaffold00044.181 211 ASIALSDLSKHFNVPMAEASRNLKVGLTVLKRKCREFGIPRWPHRKIKSL 260
689*********************************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 339 aa
Download sequence Send
to blast |
MDSFATLPLR ALAVFRNVLN EELVKSVHVY LCENGKEITV EREFMFCPNS YKQMTPIPNL 60 VHGSSGFNIH IFNNVGAIVE AIREGQQVGL WLCILLFNSH HPPVSSPLPA LLTISRNPKL 120 KSIPTLANDL QKVSEFRCAI EDEEVNTFDR QESTRVYEFN FFDKSQIAPV VHTVPSPSSF 180 AEGLSKIQHI GNSIPVRNKV WKNRAPTKHV ASIALSDLSK HFNVPMAEAS RNLKVGLTVL 240 KRKCREFGIP RWPHRKIKSL DSLIHDLQDE VKRQERENEA AAKAATKRRK LLERERETIE 300 RRPASEIQSE TKRFRQDVFK RRHKAKALSN KVATSLRI*
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