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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
evm_27.model.AmTr_v1.0_scaffold00040.86 |
| Common Name | AMTR_s00040p00117430 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
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| Family |
NAC |
| Protein Properties |
Length: 259aa MW: 29377.8 Da PI: 4.7155 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm_27.model.AmTr_v1.0_scaffold00040.86 | genome | TAGP | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 136 | 2.6e-42 | 6 | 137 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk...kvka...eekewyfFskr 64
p G+rF Pt+eel+++yLk+k++g++ +++++i+ vdiy+++Pw+Lp+ + a + ++w+fF++
evm_27.model.AmTr_v1.0_scaffold00040.86 6 PIGYRFYPTEEELLSFYLKNKLDGNReAQIDRIIPLVDIYSYDPWQLPAraaE--AnigDGEQWFFFVRI 73
89**********************996777788***************53342..2444667******** PP
NAM 65 dkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
++++++g r+nr++ sgyWkatg+ v+s+++ ++gl+k+Lvfy+grap g+kt+W m+ey+l
evm_27.model.AmTr_v1.0_scaffold00040.86 74 QERETHGGRPNRIAPSGYWKATGTPGYVYSSNNGVIGLRKSLVFYTGRAPYGRKTKWKMNEYKL 137
**************************************************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 259 aa
Download sequence Send
to blast |
MPGGFPIGYR FYPTEEELLS FYLKNKLDGN REAQIDRIIP LVDIYSYDPW QLPARAAEAN 60
IGDGEQWFFF VRIQERETHG GRPNRIAPSG YWKATGTPGY VYSSNNGVIG LRKSLVFYTG 120
RAPYGRKTKW KMNEYKLRIV ETNGDDVASS SSHGATTFAV RREMSLCRIY VKSGVLRQFD 180
RRPPVIPAIQ EPGPGPSSST WTENPNQQPT NEMIDDNVSE GLNLDRDEAG TWDPMADDFA 240
YWELMDDEIV NLESWNSI*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-31 | 5 | 172 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-31 | 5 | 172 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-31 | 5 | 172 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-31 | 5 | 172 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-31 | 5 | 172 | 20 | 168 | NAC domain-containing protein 19 |
| 3swm_B | 1e-31 | 5 | 172 | 20 | 168 | NAC domain-containing protein 19 |
| 3swm_C | 1e-31 | 5 | 172 | 20 | 168 | NAC domain-containing protein 19 |
| 3swm_D | 1e-31 | 5 | 172 | 20 | 168 | NAC domain-containing protein 19 |
| 3swp_A | 1e-31 | 5 | 172 | 20 | 168 | NAC domain-containing protein 19 |
| 3swp_B | 1e-31 | 5 | 172 | 20 | 168 | NAC domain-containing protein 19 |
| 3swp_C | 1e-31 | 5 | 172 | 20 | 168 | NAC domain-containing protein 19 |
| 3swp_D | 1e-31 | 5 | 172 | 20 | 168 | NAC domain-containing protein 19 |
| 4dul_A | 1e-31 | 5 | 172 | 17 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 1e-31 | 5 | 172 | 17 | 165 | NAC domain-containing protein 19 |
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