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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm_27.model.AmTr_v1.0_scaffold00040.172 |
Common Name | AMTR_s00040p00180260, LOC18441367 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
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Family |
ERF |
Protein Properties |
Length: 142aa MW: 15867 Da PI: 9.9783 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm_27.model.AmTr_v1.0_scaffold00040.172 | genome | TAGP | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.9 | 1.2e-18 | 10 | 60 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
sgy+GVr ++ +gr++AeIrd g +++r +lg+f+tae+Aa+a++a ++k++g
evm_27.model.AmTr_v1.0_scaffold00040.172 10 SGYTGVRKRP-WGRFAAEIRD----GaHKRRRWLGTFDTAEDAARAYDAEALKIKG 60
89********.**********....8778************************988 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 142 aa
Download sequence Send
to blast |
MAGKRQRNGS GYTGVRKRPW GRFAAEIRDG AHKRRRWLGT FDTAEDAARA YDAEALKIKG 60 PKAKTNFPIS QNTLAPGPLF PSSHNAPLQD EGFNPDQFVA EVLQCVEPQT EVIKWFKIWA 120 MAQMEDRETT VSPSNLGAFM W*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 15 | 35 | RKRPWGRFAAEIRDGAHKRRR |
Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP6 | 16 | 1718 |