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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm_27.model.AmTr_v1.0_scaffold00033.186 |
Common Name | AMTR_s00033p00212490, LOC18442603 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
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Family |
Dof |
Protein Properties |
Length: 301aa MW: 32619.5 Da PI: 8.0116 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm_27.model.AmTr_v1.0_scaffold00033.186 | genome | TAGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 127.2 | 5e-40 | 27 | 88 | 2 | 63 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
+e+ l+cprCds+ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk+sss
evm_27.model.AmTr_v1.0_scaffold00033.186 27 PEEVLRCPRCDSANTKFCYYNNYSLAQPRHFCKSCRRYWTKGGALRNVPIGGGCRKNKRSSS 88
57889*****************************************************9875 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0010052 | Biological Process | guard cell differentiation |
GO:0010118 | Biological Process | stomatal movement |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:1902066 | Biological Process | regulation of cell wall pectin metabolic process |
GO:0005634 | Cellular Component | nucleus |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 301 aa
Download sequence Send
to blast |
MQEEHRREMP DKNVSGTAGG NPILRPPEEV LRCPRCDSAN TKFCYYNNYS LAQPRHFCKS 60 CRRYWTKGGA LRNVPIGGGC RKNKRSSSKS PAPPQQPVQK NLTLDQQSST PIAPETLKFL 120 HGLSPSTMDL YQIGLPLSLS HPFMPFAEQP SSLSPTPPSS LDLGAIPLNI MNSSSGSQVQ 180 EQGFFHGGLA SSIESLSCLN ADLHWRLQQQ RWGHFLGGES ESNQRDGGGA GSGGAMVMSS 240 HGAPGQGVDS VKSDMCGFSV RKSGDMNTEW LFENAYTANA SSNGLQTWQD LQLQQYSALP 300 *
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Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP38 | 17 | 445 |