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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm_27.model.AmTr_v1.0_scaffold00030.95 |
Common Name | AMTR_s00030p00153440 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
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Family |
Dof |
Protein Properties |
Length: 281aa MW: 31023.2 Da PI: 5.3574 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm_27.model.AmTr_v1.0_scaffold00030.95 | genome | TAGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 122 | 2.1e-38 | 12 | 68 | 5 | 61 |
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
a +cprCds ntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rkn++s
evm_27.model.AmTr_v1.0_scaffold00030.95 12 APHCPRCDSPNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKNRRS 68
568***************************************************987 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 281 aa
Download sequence Send
to blast |
MDRRWKGGIE SAPHCPRCDS PNTKFCYYNN YSLTQPRYFC KSCRRYWTKG GSLRNVPVGG 60 GCRKNRRSKP SKVTGNSNPS NRSSESANSG EELMENWPDF SEIPANSEPE NSGASIDLAM 120 VYARFLRPTD TTGNSSSSDS MLQVPDLVSE TPILDPELDI ALDHGKMFRH GNSMDQGILG 180 TQLIGGFDEM KIRDISNSSS SCEYNHGFIS GFNDILWPNY SNNNNVGPLI SSTNCNWQEQ 240 WQQQGPLLDG KEEMGLGGLS PNLMVGNWNS DLATHSFANP *
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Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP38 | 17 | 445 |