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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm_27.model.AmTr_v1.0_scaffold00024.337 |
Common Name | AMTR_s00024p00250970 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
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Family |
MYB |
Protein Properties |
Length: 499aa MW: 55817.4 Da PI: 6.3855 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm_27.model.AmTr_v1.0_scaffold00024.337 | genome | TAGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 50.3 | 5.4e-16 | 50 | 97 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd ll+++++ +G g W+ +++ g+ R++k+c++rw +yl
evm_27.model.AmTr_v1.0_scaffold00024.337 50 KGPWTPEEDFLLINYINAHGEGGWTNLPKKAGLLRCGKSCRLRWMNYL 97
79******************************99************97 PP
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2 | Myb_DNA-binding | 47.4 | 4.3e-15 | 108 | 148 | 6 | 48 |
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+eE++l+++++++lG++ W++Ia +++ gRt++++k++w+++l
evm_27.model.AmTr_v1.0_scaffold00024.337 108 PEEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 148
8****************.*********.************996 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 499 aa
Download sequence Send
to blast |
MDGVSFSISL SFPPSSIPCP LLLPTAQNLH LYRSTPMGRS PCCSKLGLNK GPWTPEEDFL 60 LINYINAHGE GGWTNLPKKA GLLRCGKSCR LRWMNYLRPD VKRGYILPEE EDLILRLHRL 120 LGNRWSLIAG RIPGRTDNEI KNYWNTHLSK LLISQGIDPR THKPLAPESL TPPPPLPRTT 180 PKDPSFSRPT LLHQAHDFKP LFQEQIFTNP SHQKPSFFSY NNKENYNSHS QLPFELFPFP 240 HQPYPLKKEV EEVEFGAAPI MAIGNLSTMD FGALKNEVGE LKYPMMSTTQ MPTYVFHDHL 300 TLFPTASIED QNDQKQVMIS FANQNPLEPS LMEGSSMGLL HSNPIMQFGS SISTGFDLQP 360 ILTPMAYSSG QVSEIACSSM DHFAGLCHQQ QQQQFQPQQH QELQVQAPED RHKACDIQVH 420 YDLHNNGPLI QGVDGAFPVI IPPPDHFLLN PVNGEDCTSN LATNGTGWPN FNGDAALLSY 480 VHDMPPPLSS FQASVQEL*
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Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP5 | 17 | 1784 |