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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm_27.model.AmTr_v1.0_scaffold00024.225 |
Common Name | AMTR_s00024p00225650 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
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Family |
MYB |
Protein Properties |
Length: 257aa MW: 29301.8 Da PI: 7.0885 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm_27.model.AmTr_v1.0_scaffold00024.225 | genome | TAGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 56.3 | 7.4e-18 | 7 | 54 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd++l +++k +G + W +I+++ g++R++k+c++rw++yl
evm_27.model.AmTr_v1.0_scaffold00024.225 7 KGAWTAEEDQILSQCIKTHGAKKWQSIPAKAGLKRCGKSCRLRWLNYL 54
79********************************************97 PP
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2 | Myb_DNA-binding | 55.9 | 9.7e-18 | 60 | 105 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+ ++eE++l+++++k+lG++ W++Ia +++ gRt++++k++w++yl
evm_27.model.AmTr_v1.0_scaffold00024.225 60 RGNISEEEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTYL 105
7899******************.*********.*************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 257 aa
Download sequence Send
to blast |
MAKNVNKGAW TAEEDQILSQ CIKTHGAKKW QSIPAKAGLK RCGKSCRLRW LNYLRPCIKR 60 GNISEEEEDL IIRLHKLLGN RWSLIAGRLP GRTDNEIKNY WNTYLSKKLK FEKPAEDPKQ 120 RPRPKKQRLE TPTMRDSEPF NMEVSSSNSG HRSNGPSDAE HKISAVQAEN FKLGEDSSHA 180 GLVKDLEVVN FGDSYEVSRE EFSLDWLSNF LEADEEELGF LSSNNYLEEE YRDLIGISPL 240 YSWTSSSFAC TNHNCN*
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Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP5 | 17 | 1784 |