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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm_27.model.AmTr_v1.0_scaffold00021.27 |
Common Name | AMTR_s00021p00057700, LOC18442135 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
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Family |
Dof |
Protein Properties |
Length: 146aa MW: 16655.8 Da PI: 9.1616 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm_27.model.AmTr_v1.0_scaffold00021.27 | genome | TAGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 119.8 | 1e-37 | 41 | 99 | 2 | 60 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
+e++++cprC+s++tkfCy+nny+++qPr+fC++C+ryWt+GGalrnvPvG+grr++ +
evm_27.model.AmTr_v1.0_scaffold00021.27 41 PENSVQCPRCKSKETKFCYFNNYNVNQPRHFCRGCQRYWTAGGALRNVPVGAGRRRKMQ 99
67899**************************************************9865 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
GO:1902455 | Biological Process | negative regulation of stem cell population maintenance |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 146 aa
Download sequence Send
to blast |
MPKESVFKLF GKRIPINSEI EENQLQQREV EESDESRVRR PENSVQCPRC KSKETKFCYF 60 NNYNVNQPRH FCRGCQRYWT AGGALRNVPV GAGRRRKMQH LPQGEVSACG NDGGHVLIGG 120 NLFDQPGFRQ TGSRCSRMVF TFEEP*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence (By similarity). Transcriptional repressor of 'CONSTANS' expression (By similarity). Regulates a photoperiodic flowering response. {ECO:0000250, ECO:0000269|PubMed:19619493}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Circadian-regulation. The transcript level rises progressively from dawn and decreases during the night. {ECO:0000269|PubMed:19619493}. |
Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP38 | 17 | 445 |