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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm_27.model.AmTr_v1.0_scaffold00016.162 |
Common Name | AMTR_s00016p00196760, LOC18434441 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
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Family |
NAC |
Protein Properties |
Length: 235aa MW: 26701.4 Da PI: 9.9208 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm_27.model.AmTr_v1.0_scaffold00016.162 | genome | TAGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 163.6 | 7.4e-51 | 14 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkya 69
lppGfrFhPtdeelv +yLk+kv + +l+ ++i+++diyk++Pw+Lp +e +e yfF ++ ky+
evm_27.model.AmTr_v1.0_scaffold00016.162 14 LPPGFRFHPTDEELVIQYLKRKVFSCPLPS-SIIADIDIYKHDPWELP---GEEGQEKYFFNIKEAKYP 78
79**************************99.89***************...4467899*********** PP
NAM 70 tgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
+g+r+nra+++gyWkatg dk+vls+ ++++vg+kk+Lvfy+g+apkg+ktdW+mheyrl
evm_27.model.AmTr_v1.0_scaffold00016.162 79 NGNRPNRAAATGYWKATGIDKPVLSSrSNQVVGMKKSLVFYRGKAPKGVKTDWIMHEYRL 138
************************9866778***************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 235 aa
Download sequence Send
to blast |
MEKERSFKEA MVKLPPGFRF HPTDEELVIQ YLKRKVFSCP LPSSIIADID IYKHDPWELP 60 GEEGQEKYFF NIKEAKYPNG NRPNRAAATG YWKATGIDKP VLSSRSNQVV GMKKSLVFYR 120 GKAPKGVKTD WIMHEYRLAE AGAKPCNISA RKSSIQNYMA PVEDWVVCRI FLKKRGPKRE 180 ARVEHGIHLS SNYRTGFIDF MLQQQNSRNA REDINNEESS SCSSTLTSSS SKSA*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional repressor that negatively regulates the expression of genes involved in xylem vessel formation. Represses the transcriptional activation activity of NAC030/VND7, which regulates protoxylem vessel differentiation by promoting immature xylem vessel-specific genes expression (PubMed:20388856). Transcriptional activator that regulates the COLD-REGULATED (COR15A and COR15B) and RESPONSIVE TO DEHYDRATION (LTI78/RD29A and LTI65/RD29B) genes by binding directly to their promoters. Mediates signaling crosstalk between salt stress response and leaf aging process (PubMed:21673078). May play a role in DNA replication of mungbean yellow mosaic virus (PubMed:24442717). {ECO:0000269|PubMed:20388856, ECO:0000269|PubMed:21673078, ECO:0000269|PubMed:24442717}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By abscisic acid (ABA) and salt stress. {ECO:0000269|PubMed:21673078}. |
Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP17 | 15 | 800 |