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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
evm_27.model.AmTr_v1.0_scaffold00010.54 |
Common Name | AMTR_s00010p00098700 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
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Family |
ERF |
Protein Properties |
Length: 284aa MW: 31743.7 Da PI: 4.6126 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm_27.model.AmTr_v1.0_scaffold00010.54 | genome | TAGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63.4 | 4.8e-20 | 75 | 124 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp + r++lg+f taeeAa+a++a + +++g
evm_27.model.AmTr_v1.0_scaffold00010.54 75 KYRGVRQRP-WGKWAAEIRDP-----HrgIRVWLGTFETAEEAARAYDAKAVEYRG 124
8********.**********6.....337*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 284 aa
Download sequence Send
to blast |
MSKRTTPPSH LGDHQAHRQE QEDAIMVRAF QQVISGASCS PDELEPAPSE TCGGSSSLPV 60 EPTADPTSSS SKRRKYRGVR QRPWGKWAAE IRDPHRGIRV WLGTFETAEE AARAYDAKAV 120 EYRGPRANLN FPDDALLLYQ AASPIPRAPE KSNYQFESQP YQPHQQSTEL QEVGSTSGSI 180 SSQVDAREQV NVQYRQTVQT SDYPVWDMVP NSSSCEHYYS TYESFSTECE VYDSLSEPLP 240 QQNQTEGLPV SFATIPLDQD WSFTNPLDEF PFVATTRPPD HIP*
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Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP6 | 16 | 1718 |