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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm_27.model.AmTr_v1.0_scaffold00010.176 |
Common Name | AMTR_s00010p00194910 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
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Family |
ERF |
Protein Properties |
Length: 273aa MW: 29988.7 Da PI: 7.1801 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm_27.model.AmTr_v1.0_scaffold00010.176 | genome | TAGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 66 | 7.6e-21 | 96 | 145 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +g+WvAeIr p++ r+r +lg+f+taeeAa a+++a+ kl+g
evm_27.model.AmTr_v1.0_scaffold00010.176 96 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRG 145
59******9.**********965...5*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 273 aa
Download sequence Send
to blast |
MVSQGVFVPE PAFLSMAHEH RTDIQPTLNP LQIQAQAHLQ WQQQQQQSIQ FHHSHPQAHQ 60 RLNPLAFLGP RAQPMKRMGA PRAMNHGSTG SKPAKLYRGV RQRHWGKWVA EIRLPKNRTR 120 LWLGTFDTAE EAALAYDKAA YKLRGDYARL NFPHLRHHLG FNGGNELGSL QSSVDAKLQA 180 ICQGLVGSGQ VSVPSATGLV KTEEVTSVVG SESEDSGEVA GNSSPSPDLS PDSGVKQPDF 240 SGPPWDDLDA YLLMKLPSLD QDLNWDLILS DV*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP6 | 16 | 1718 |