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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm_27.model.AmTr_v1.0_scaffold00006.294 |
Common Name | AMTR_s00006p00266920, LOC18434083 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
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Family |
ERF |
Protein Properties |
Length: 309aa MW: 34098.4 Da PI: 9.7903 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm_27.model.AmTr_v1.0_scaffold00006.294 | genome | TAGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 52.5 | 1.2e-16 | 108 | 156 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ GVr+++ +grWvAeI+d ++ r +lg+f+ aeeAaka++aa++ l+g
evm_27.model.AmTr_v1.0_scaffold00006.294 108 FLGVRQRP-SGRWVAEIKDaS----QKLRLWLGTFDRAEEAAKAYDAAARILRG 156
56******.7*********44....46***********************9998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 309 aa
Download sequence Send
to blast |
MALLSSSKSH NPSFNGGKTH QIAIEKDPLF PPNMAQDIHS ETSPSFHGGA QSHQLARGKE 60 PISSSSATQE SSPPESHDPN FNGGLKPHRI APEKELLPQK QGSKTMRFLG VRQRPSGRWV 120 AEIKDASQKL RLWLGTFDRA EEAAKAYDAA ARILRGKNAK TNFQTDEFSR SSCLKNPKFQ 180 HLLLKAMAKR RYADQVRKNS SYLCNENLRF LEGETSLIES GEPTRTGEMM HGEGLSCYLG 240 RGNLVYGDGR VWSGGGEDFS RVLYGSKVYS TVHVAPSFNV SLHLESVVRK DKTNPLLVEN 300 GWLDAVSM*
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Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP6 | 16 | 1718 |