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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.supercontig_9.75 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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Family | bZIP | ||||||||
Protein Properties | Length: 158aa MW: 17862.6 Da PI: 9.6945 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 29 | 2.3e-09 | 25 | 76 | 4 | 55 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 kr +r+ +NRe+ArrsR+R++++ie L ++++ L + ++ k+ + + + evm.model.supercontig_9.75 25 EKRRKRMLSNRESARRSRLRRQKQIEDLVNEIALLNRKIQEGNKRFDIIMES 76 59*******************************9988766555555555555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 7.0E-9 | 22 | 86 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.6E-6 | 24 | 97 | No hit | No description |
PROSITE profile | PS50217 | 9.461 | 24 | 87 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 8.6E-8 | 26 | 83 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.75E-8 | 26 | 78 | No hit | No description |
CDD | cd14702 | 1.90E-12 | 27 | 75 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 29 | 44 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006521 | Biological Process | regulation of cellular amino acid metabolic process | ||||
GO:0009267 | Biological Process | cellular response to starvation | ||||
GO:0009617 | Biological Process | response to bacterium | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009901 | Biological Process | anther dehiscence | ||||
GO:0010182 | Biological Process | sugar mediated signaling pathway | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0071333 | Biological Process | cellular response to glucose stimulus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 158 aa Download sequence Send to blast |
MVKQGIQLTN SVLEKDARYA VITDEKRRKR MLSNRESARR SRLRRQKQIE DLVNEIALLN 60 RKIQEGNKRF DIIMESNKAV ESENNVLRAE KTRLANYMFH LEIMILNSCM QVGSSSVAGC 120 SCDGQSSEKM ASPELCRVPW QVGGATQPII SPGIFEF* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | evm.model.supercontig_9.75 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021906709.1 | 1e-113 | basic leucine zipper 1-like | ||||
STRING | evm.model.supercontig_9.75 | 1e-112 | (Carica papaya) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM12581 | 22 | 31 | Representative plant | OGRP13793 | 3 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49450.1 | 4e-18 | basic leucine-zipper 1 |
Link Out ? help Back to Top | |
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Phytozome | evm.model.supercontig_9.75 |