 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
evm.model.supercontig_9.36 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
| Family |
WRKY |
| Protein Properties |
Length: 394aa MW: 43252.5 Da PI: 6.6293 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_9.36 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 105.4 | 3.1e-33 | 210 | 268 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK vk+s++prsYYrCts gC vkk+vers+edp++v++tYeg+H+h+
evm.model.supercontig_9.36 210 LDDGYRWRKYGQKAVKNSPYPRSYYRCTSGGCGVKKRVERSSEDPTIVVTTYEGQHTHP 268
59********************************************************8 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0010200 | Biological Process | response to chitin |
| GO:0042742 | Biological Process | defense response to bacterium |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 394 aa
Download sequence Send
to blast |
MEKKKIEEEL GETSNWNMAN SMFSDEATLA FSSIFDNMTP CDHGGSGYSG SGSGSGSGYS 60
FGFTDLLGIN HDFPASSSPL FDYYSSLHHP PTNAFPFPTT QQFQGQGQDQ EQEKKKQGLA 120
PSPVSTTVAA ESSEVLNNPP TPNSSSISSY SNEAGNDDDH HHHHQQSTKD QEDEQDQDKS 180
KKQLKPKKKN QKKQREPRFA FMTKSEVDHL DDGYRWRKYG QKAVKNSPYP RSYYRCTSGG 240
CGVKKRVERS SEDPTIVVTT YEGQHTHPCP ITPRGSIGSI LPQNPTAENL IGATASSFLE 300
PPYLNRQQHQ RPYIYSPSPS SNVINISTSN STGPVGTTTF IDPTSFSSFA NVPPAPSPSP 360
TPTLSLLRDH GLLQDIVPSQ MIRSINEPKT ELK*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
