PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_863.1
Organism
Carica papaya
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family G2-like
Protein Properties Length: 116aa    MW: 12840.3 Da    PI: 4.2536
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_863.1genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like23.41.4e-0789112124
                      G2-like   1 kprlrWtpeLHerFveaveqLGGs 24 
                                  kp+ +W  eLH+rF+ av+qLGG+
  evm.model.supercontig_863.1  89 KPQSKWIGELHNRFLGAVRQLGGP 112
                                  68899******************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.6E-489111IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    Send to blast
MMGTNRNVDM IRAGMKDEGK LRDGRHDQLD HGDSNKLLFL QETMAPATPV IKSRNDDLDF  60
VLIDDIDDED SEEEEEEAGG PLAVSTVMKP QSKWIGELHN RFLGAVRQLG GPFSE*
Cis-element ? help Back to Top
SourceLink
PlantRegMapevm.model.supercontig_863.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGevm.model.supercontig_863.16e-79(Carica papaya)