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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
evm.model.supercontig_86.17 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
| Family |
ARR-B |
| Protein Properties |
Length: 577aa MW: 64756.1 Da PI: 5.8937 |
| Description |
ARR-B family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_86.17 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 77.2 | 2.1e-24 | 200 | 253 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k+r++W+ eLH++Fv+av+q+ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl
evm.model.supercontig_86.17 200 KARVVWSVELHQKFVKAVNQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 253
68*******************.9*******************************8 PP
|
| 2 | Response_reg | 83.3 | 7.4e-28 | 20 | 128 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEEST CS
Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtah 80
vl+vdD+p+ +++l+++l+k y ev+++ ++eal+ll+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++
evm.model.supercontig_86.17 20 VLVVDDDPTWLKILEKMLKKCSY-EVTTCCLAREALKLLRERKdgYDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVD 99
89*********************.***************999999**********************6644.8********* PP
TTHHHHHHHHHTTESEEEESS--HHHHHH CS
Response_reg 81 geeedalealkaGakdflsKpfdpeelvk 109
ge + + + ++ Ga d+l Kp+ ++el++
evm.model.supercontig_86.17 100 GETSRVMKGVQHGACDYLLKPIRMKELRN 128
**************************987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0000160 | Biological Process | phosphorelay signal transduction system |
| GO:0009735 | Biological Process | response to cytokinin |
| GO:0010082 | Biological Process | regulation of root meristem growth |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 577 aa
Download sequence Send
to blast |
MIENGFSSPR SDSFPAGLRV LVVDDDPTWL KILEKMLKKC SYEVTTCCLA REALKLLRER 60
KDGYDIVISD VNMPDMDGFK LLEHVGLEMD LPVIMMSVDG ETSRVMKGVQ HGACDYLLKP 120
IRMKELRNIW QHVFRKKIHE VRDIESLEGI DSIGMTRNGS EQSDDAHLLS AEDMTLIKKR 180
KDVENRHDDK DLSDPSSTKK ARVVWSVELH QKFVKAVNQI GFDKVGPKKI LDLMNVPWLT 240
RENVASHLQK YRLYLSRLQK ENELKSSFGG IKHSDSPPKD ATGSYGLQNS INVHPNDVLD 300
GSHGLSGGNS LLQSVDRNTD EVDRKGIASV ATTESKRSLA VDVSNPQKPR CAQMGFDHPL 360
ASLEPEVNFM TFGSNVPAQY SWSEIPGVQF KQDHKPLEFE ESLSQLPLSG LHHHVQTDYL 420
PPAASVSPGP SITERDVKHS SNRCKSNHVD PISSSSANDL FPVQSKSQMV SQSAFQPVNT 480
TSSDIENQGF NQTYVTNLES IQRNLNWGIN SPYASLNEDL QFCLLQGDCY SMNLGLQGVE 540
FTDYNNLELF TEVPIHLYDA MRFDCDHLYA KQNMLL*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Could directly activate some type-A response regulators in response to cytokinins (By similarity). {ECO:0000250, ECO:0000269|PubMed:12610214}. |
