PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_85.93
Organism
Carica papaya
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family bZIP
Protein Properties Length: 515aa    MW: 57690.7 Da    PI: 7.5267
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_85.93genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.35.2e-11221262344
                                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                       bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 
                                  + k  rr+++NReAAr+sR+RKka++++Le    +L++  ++
  evm.model.supercontig_85.93 221 DAKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQE 262
                                  67999*************************876666655554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.0E-8218265No hitNo description
SMARTSM003385.5E-8219292IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.278221265IPR004827Basic-leucine zipper domain
PfamPF001703.3E-8222263IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.19E-6223265No hitNo description
CDDcd147081.63E-22223272No hitNo description
PROSITE patternPS000360226241IPR004827Basic-leucine zipper domain
PfamPF141447.4E-32314387IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 515 aa     Download sequence    Send to blast
MGYSGAIQVV TIAAPEEEEE DRKLVGVPFM ASSTKPTNNN NHSIHLDHHQ QQVHHHQMQE  60
QHRHHHHHHQ YNPHHHNHHQ NPYGMMQSSS SSSSIHGNFI NKDTGSYDLS ELDQALFLYL  120
DGQNQSTVQD QRQNSGMRPP TLNIFPSQPM HVEPSSTKTS TGLVSPPTSG SKRPSDPSTG  180
LANARNDAPP SGPEPAKTIK REGNRKGPTS GSEHEGPKTP DAKTLRRLAQ NREAARKSRL  240
RKKAYVQQLE SSRIKLTQLE QELQRARAQG IFFGGAGLLG GEQGLPVGVN NISSDAAMFD  300
MEYARWLEEH HRLMSELRAA VQEHIPENEL RLFVDNCLAH YDQVINLKAM LAKTDVFHLV  360
SGMWKTPAER CFMWLGGFRP SELIKIIPNQ VEPLTEQQIL GICGLQQSTQ EAEEALSQGL  420
EALNQSLSDT ITSDSLSCPT NMTNYMGQMA LAINKLSTLE GFVRQADNLR HQTLHRLQQI  480
LTTRQAARCL LAIAEYFHRL RTLSSLWLAR PRQE*
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapevm.model.supercontig_85.93
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022766760.10.0bZIP transcription factor TGA10-like
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A1U8HTZ20.0A0A1U8HTZ2_GOSHI; transcription factor TGA2-like isoform X2
STRINGevm.model.supercontig_85.930.0(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM72072843
Representative plantOGRP75161218
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.30.0bZIP family protein