 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
evm.model.supercontig_84.104 |
Common Name | EIN3a |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
Family |
EIL |
Protein Properties |
Length: 339aa MW: 37795 Da PI: 4.3283 |
Description |
EIL family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm.model.supercontig_84.104 | genome | ASGPB | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | EIN3 | 23.1 | 1.2e-07 | 1 | 108 | 238 | 313 |
--SHHHHHHHHHHTTTTT-S--XXXXXX........XXXX.XXXXXXXXXXXXXXXX..........XXXXXX.XXXXXXX CS
EIN3 238 msakesfallsvlnqeekecatvsahss........slrk.qspkvtlsceqkedve..........gkkeskikhvqavk 299
m+akes+++l+v+ +ee++++++s+++ r+ ++++ +s+++++dv+ +++
evm.model.supercontig_84.104 1 MTAKESAIWLAVMDREESLIRQLSSDNGlsgvtetpPGRNvDRTRPAISSDSDYDVDgfddcvgsatS----------KDD 71
99************************554567767633445888999999*******75554443332..........333 PP
XXX.......................XXXXXXXXXXX CS
EIN3 300 tta.......................gfpvvrkrkkk 313
++ +++ + ++k++
evm.model.supercontig_84.104 72 RRIqpvdaeslrntrndtsdhaqekeQVEKQPRKKRR 108
2222333333333555444444443333333333333 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 339 aa
Download sequence Send
to blast |
MTAKESAIWL AVMDREESLI RQLSSDNGLS GVTETPPGRN VDRTRPAISS DSDYDVDGFD 60 DCVGSATSKD DRRIQPVDAE SLRNTRNDTS DHAQEKEQVE KQPRKKRRRL KSGDADQQPG 120 PTIEEHAHAE LTNSLPDMNN SDIPLLEYHI HGRQQGNGVV TAARSLDNNI EGQPQASISE 180 FNPYSGVPYA FETPQPGMFA DERRMVHPLV QNAEMHQGTT YNIDSQSVEY GPVHDGLNSQ 240 MEVNVQQNRS EDVAYPPALH RNENEIVGAE LHNYGKETYQ NEQERAFDNN FGSPMGSLQL 300 DFDFDNAFTA SPLHLGLTCT GSFEDLWHDE DLIEYFGA*
|
Nucleic Localization
Signal ? help
Back to Top |
 |
No. |
Start |
End |
Sequence |
1 | 102 | 109 | PRKKRRRL |
2 | 105 | 109 | KRRRL |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | KF709948 | 0.0 | KF709948.1 Carica papaya ethylene insensitive 3a (EIN3a) mRNA, complete cds. |