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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm.model.supercontig_83.99 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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Family |
NAC |
Protein Properties |
Length: 314aa MW: 34947.4 Da PI: 9.2087 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm.model.supercontig_83.99 | genome | ASGPB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 107.1 | 2.1e-33 | 70 | 210 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee...vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgk 72
lp+G++F+Ptd+el+ e+L+ kv+ + ++ e +++ +i++++P++Lp v+++ +fF++ +k+y+tg+
evm.model.supercontig_83.99 70 LPAGVKFDPTDQELL-EHLEGKVRCDArklhplID--EfipTLEGEnGICYTHPEKLP-GVRKDGLVRHFFHRPSKAYTTGT 147
799************.99****9999855644322..22222333336**********.566666788************** PP
NAM 73 rknratk......sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
rk+r+++ + +W++tgk+++v+ +g+++g kk+Lv+y g+++k+ekt+Wvmh+y+l
evm.model.supercontig_83.99 148 RKRRKVHsdseggETRWHKTGKTRPVFI-GGKAKGYKKILVLYtnYGKQKKPEKTNWVMHQYHL 210
****855455544678************.99************6658999************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:2000652 | Biological Process | regulation of secondary cell wall biogenesis |
GO:0005634 | Cellular Component | nucleus |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 314 aa
Download sequence Send
to blast |
MTWCSDCSDV QTLDTATNTP PLSSNKTTTA VIAAADRSLR PSLTKTCPSC GHQIKCHDQG 60 SGLINDLPGL PAGVKFDPTD QELLEHLEGK VRCDARKLHP LIDEFIPTLE GENGICYTHP 120 EKLPGVRKDG LVRHFFHRPS KAYTTGTRKR RKVHSDSEGG ETRWHKTGKT RPVFIGGKAK 180 GYKKILVLYT NYGKQKKPEK TNWVMHQYHL GNNEEEKDGE LVVSKVFYQT QPRQCGSAVI 240 KDMTHHPPKL KGQGHEGSNF KNSCSTTTTP NIDHHRHYYN PPFISFDQGG QNRSSSAQIL 300 PHFAVHDGSS FIP*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that plays a regulatory role in the development of secondary cell wall fibers (PubMed:18952777,PubMed:22133261). Involved in the regulation of cellulose and hemicellulose biosynthetic genes as well as of genes involved in lignin polymerization and signaling (PubMed:22133261). Is not a direct target of SND1 (PubMed:18952777). {ECO:0000269|PubMed:18952777, ECO:0000269|PubMed:22133261}. |