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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm.model.supercontig_70.6 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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Family |
CO-like |
Protein Properties |
Length: 381aa MW: 41474 Da PI: 5.7192 |
Description |
CO-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm.model.supercontig_70.6 | genome | ASGPB | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-B_box | 20.1 | 1.3e-06 | 24 | 64 | 4 | 38 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38
r+C+++ + + +C+ ++ +lC++C H H+
evm.model.supercontig_70.6 24 RMCDTCRSAACTVYCRADSAYLCANCDARVHAAnrvasrHE 64
68******99*****************99995555666676 PP
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2 | zf-B_box | 30.5 | 7.7e-10 | 66 | 111 | 3 | 42 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
++C+ +e+ ++ + C+ + lC++C +H+ H++vp+
evm.model.supercontig_70.6 66 VWVCESCERAPAAFLCKADAASLCASCDADIHSAnplarrHQRVPI 111
689*****************************66899999**9997 PP
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3 | CCT | 70.3 | 4.7e-24 | 309 | 352 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44
Rea++lRY+eK+ktRkFeK+irY+sRKa+Ae+RpR+KGrF+k++
evm.model.supercontig_70.6 309 REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRT 352
9*****************************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009658 | Biological Process | chloroplast organization |
GO:0009909 | Biological Process | regulation of flower development |
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
GO:0048576 | Biological Process | positive regulation of short-day photoperiodism, flowering |
GO:0048579 | Biological Process | negative regulation of long-day photoperiodism, flowering |
GO:0005622 | Cellular Component | intracellular |
GO:0005515 | Molecular Function | protein binding |
GO:0008270 | Molecular Function | zinc ion binding |
Sequence ? help Back to Top |
Protein Sequence Length: 381 aa
Download sequence Send
to blast |
MLKEEISDGG SGGRGGGGEN NWARMCDTCR SAACTVYCRA DSAYLCANCD ARVHAANRVA 60 SRHERVWVCE SCERAPAAFL CKADAASLCA SCDADIHSAN PLARRHQRVP ILPISGCLYG 120 GPASEPGDEM GTTDDGFVTE EGIGEEEEEE AASWLLLNPG KNSNNNQSNG LLFGGDQVDE 180 YLDLVEYNCG GDQNQFHPQQ QFGVAVMEKS SSYGGDSVVP VQCAEGHHQF HHHNFQLGLD 240 YEPSKAHYTY SGSINHSVSM SSMEVGVVPE SGISEISVSH TRPPKGTIDL FCGNPNQIPV 300 ATQLSPLDRE ARVLRYREKK KTRKFEKTIR YASRKAYAET RPRIKGRFAK RTDHVDLEVD 360 QIFSTPLTAA DTGYGIVPSF *
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Functional Description ? help
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Source |
Description |
UniProt | Putative transcription factor. Does not affect flowering time. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Expressed with a circadian rhythm showing a peak at dawn. |