PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.supercontig_70.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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Family | bZIP | ||||||||
Protein Properties | Length: 171aa MW: 19740.9 Da PI: 6.0114 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47.9 | 3e-15 | 56 | 105 | 5 | 54 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 +++rr+++NRe+ArrsR RK+ ++eL v L +eN++L+++l++ ++ evm.model.supercontig_70.1 56 RKQRRMISNRESARRSRMRKQRHLDELWSQVVWLRNENHQLIDKLSHVSE 105 689******************************************99877 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.4E-15 | 52 | 116 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.346 | 54 | 117 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.34E-13 | 56 | 105 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.2E-13 | 56 | 129 | No hit | No description |
Pfam | PF00170 | 3.6E-13 | 56 | 113 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 8.64E-17 | 57 | 108 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 59 | 74 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence Send to blast |
MTQNSPAFQL NQFSNPLYSF QIPSHTQDLN TQSSCFSSNS TSDEAEEKQL SLINERKQRR 60 MISNRESARR SRMRKQRHLD ELWSQVVWLR NENHQLIDKL SHVSECHDRV LQENAQLKEE 120 ASELRQMLTD MQLSSPYSTF RDLDDVPCNT AYLKAESSNQ SITGSMDLLG * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 68 | 75 | RRSRMRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00389 | DAP | Transfer from AT3G30530 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | evm.model.supercontig_70.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021895721.1 | 1e-123 | basic leucine zipper 43-like | ||||
Swissprot | Q9FMC2 | 4e-48 | BZP43_ARATH; Basic leucine zipper 43 | ||||
TrEMBL | A0A2P5BGE3 | 8e-91 | A0A2P5BGE3_TREOI; Basic-leucine zipper transcription factor | ||||
STRING | evm.model.supercontig_70.1 | 1e-122 | (Carica papaya) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM3112 | 26 | 67 | Representative plant | OGRP3104 | 11 | 29 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 2e-53 | basic leucine-zipper 42 |
Link Out ? help Back to Top | |
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Phytozome | evm.model.supercontig_70.1 |
Publications ? help Back to Top | |||
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