 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
evm.model.supercontig_7.239 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
| Family |
HRT-like |
| Protein Properties |
Length: 135aa MW: 14325.2 Da PI: 9.3528 |
| Description |
HRT-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_7.239 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HRT-like | 31.2 | 3.8e-10 | 52 | 77 | 1 | 26 |
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeH 26
+CG++l++Gs+C+r+ kg RC++H
evm.model.supercontig_7.239 52 VCGAALRNGSFCTRSLTKGHERCWQH 77
7************************* PP
|
| 2 | HRT-like | 54.1 | 2.5e-17 | 100 | 129 | 1 | 30 |
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmR 30
iCGv+ GsvC+++P+ gRKRCe+HKGmR
evm.model.supercontig_7.239 100 ICGVTSPGGSVCEKSPAGGRKRCEQHKGMR 129
8***************************** PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 135 aa
Download sequence Send
to blast |
MKINALISKS AKNKSGVNLG GCASDNELHN DPASKSMLFS DRCSTDRDPK TVCGAALRNG 60
SFCTRSLTKG HERCWQHRVN GCDSSFSCSL KSDSQSRSVI CGVTSPGGSV CEKSPAGGRK 120
RCEQHKGMRL IVSQ*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator involved in the regulation of cell differentiation in meristems (By similarity). Binds DNA without sequence preference (PubMed:22226340). {ECO:0000250|UniProtKB:F4K933, ECO:0000269|PubMed:22226340}. |
