PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_7.130
Organism
Carica papaya
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family ERF
Protein Properties Length: 638aa    MW: 71276 Da    PI: 7.7425
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_7.130genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.62.7e-122677256
                          AP2  2 gykGVrwdkkrgrWvAeIrdpseng.kr..krfslgkfgtaeeAakaaiaarkklege 56
                                  ++GV++++  ++W A+   +   g  +  k+ +lg+f t eeAa+a++ a  +l+g+
  evm.model.supercontig_7.130 26 NFRGVSRNSDFKKWQAR---V---GkSTilKTLYLGTFETQEEAARAYDIASIRLKGH 77
                                 69***************...5...432357***********************99986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541717.19E-132585IPR016177DNA-binding domain
CDDcd000184.63E-162584No hitNo description
PROSITE profilePS5103215.8042684IPR001471AP2/ERF domain
SMARTSM003801.9E-162690IPR001471AP2/ERF domain
PfamPF008471.2E-72677IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.7E-152684IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 638 aa     Download sequence    Send to blast
MKGLSNDEYF LAIRRNSKGF AKGESNFRGV SRNSDFKKWQ ARVGKSTILK TLYLGTFETQ  60
EEAARAYDIA SIRLKGHKAV TNYDLNQYDI HGILRCPRIP IGRGASKKIR TCTVEEILSK  120
RRESERLELT NLEDTIPEDG DQSSNGRPFS GDPELGVSGF GNSFPRECFT MPVHNQISQH  180
YPDSSLSQNH GFSSSQAHQN CPGYGGHDLD IPFFTHGFYN PYIPTKPGFL HKLSSTDRNA  240
YQGNAKSSYQ NPFPSLPTSN NGLQFPYLQT NPHFVHGSCS TRLGGNEFSG NPNKDPYFPL  300
NPSFFSCSYS NRVDRNGFLE NLNKNLDFPP KQNLFPGSYG GRVDGNEFSG NPNKNLDFYL  360
NPNFFPGSCS NRVGGDEFFG NPNRNLDFPL NPNFFLGSCG NRVDGNGFSK NSNRNLDFSP  420
KPNFFPDSYS CRVDVNEISG NPNRNLNFPL NPNFFPTSTS NRFDEDDFFG NSNKNQGFQT  480
HSKFFHGPSR NDVLGNRSFR NPNETFGLQK TPNVFLPNSS TTRFDENVIF GNPTKNFDFQ  540
NRTFSPGSSS SRVDGNIFSK NPNSTYNEDS STGAEMNFRR MDIGNLTDKG KSIVRNSPLE  600
NSKIEGPIDS DSDDEINFPP CGFDMNSKQL SSSSSNQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapevm.model.supercontig_7.130
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021907742.11e-157AP2-like ethylene-responsive transcription factor PLT1
STRINGevm.model.supercontig_7.1300.0(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM17569610
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20840.12e-35AP2 family protein