 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
evm.model.supercontig_69.81 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
| Family |
TALE |
| Protein Properties |
Length: 143aa MW: 16442.4 Da PI: 7.7756 |
| Description |
TALE family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_69.81 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 30.8 | 5e-10 | 85 | 119 | 21 | 55 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55
k +yp+++++ LA+++gL+++q+ +WF N+R ++
evm.model.supercontig_69.81 85 KWPYPTEADKNALADSTGLDQKQINNWFINQRKRH 119
569*****************************985 PP
|
| 2 | ELK | 26.8 | 1.2e-09 | 39 | 60 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22
++K+ Llr ++++++sLk EFs
evm.model.supercontig_69.81 39 DIKDKLLRRFGSHISSLKLEFS 60
58*******************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 143 aa
Download sequence Send
to blast |
MKIENDKVVS EDGAASSEDE FSGGEIEVQE GQPRSDDQDI KDKLLRRFGS HISSLKLEFS 60
KKKKKGKLPR EARQILLSWW NVHYKWPYPT EADKNALADS TGLDQKQINN WFINQRKRHW 120
KPSENMPFGL MDNISGQFFT GD*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Plays a role in meristem function. Contributes to the shoot apical meristem (SAM) maintenance and organ separation by controlling boundary establishment in embryo in a CUC1, CUC2 and STM-dependent manner. Involved in maintaining cells in an undifferentiated, meristematic state. Probably binds to the DNA sequence 5'-TGAC-3'. {ECO:0000269|PubMed:16798887}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Seems to be repressed by AS2 and AS1 but induced by STM, CUC1 and CUC2. {ECO:0000269|PubMed:11311158, ECO:0000269|PubMed:16798887}. |
