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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
evm.model.supercontig_65.159 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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| Family |
WOX |
| Protein Properties |
Length: 311aa MW: 35438.1 Da PI: 7.9229 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_65.159 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 70.7 | 1.7e-22 | 81 | 140 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
+R+++t+eql +Leel+++ +r+p+a++++++A+kl +++ ++V++WFqN++a+e++
evm.model.supercontig_65.159 81 SRWNPTPEQLLALEELYRQgTRTPTADQIQQIAAKLrrfgKIEGKNVFYWFQNHKARERQ 140
8*****************99**************************************97 PP
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| 2 | Wus_type_Homeobox | 115.2 | 3.1e-37 | 80 | 142 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
++RW+PtpeQ+ Leely++G+rtP++++iq+i+a+L+++Gkie+kNVfyWFQN+kaRerqk+
evm.model.supercontig_65.159 80 SSRWNPTPEQLLALEELYRQGTRTPTADQIQQIAAKLRRFGKIEGKNVFYWFQNHKARERQKR 142
79***********************************************************95 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 311 aa
Download sequence Send
to blast |
MGCSDHSKDL NIKPLSSDTA QNFMSNYNTS SSQNTTTINT QLLHTCTPTN FLALNHHQGN 60
GSDHHHQQSS TEFSEQPLSS SRWNPTPEQL LALEELYRQG TRTPTADQIQ QIAAKLRRFG 120
KIEGKNVFYW FQNHKARERQ KRRRQVESVS HDQCEIQSLG KKDQVLRRTD YEFEQIESWT 180
AYSNCRKLIN EELIPKHGQA TEEASTGTTN EQNMKASYYS PIHLTNTITK PAPSHTNSSS 240
CSSLKANYFP NFLEDSESRE TQTLELFPLH SSGHNGNINC NKRETKLPIT SLINTKLTPS 300
QYFEFLPLKN *
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