 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
evm.model.supercontig_6.368 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
Family |
WOX |
Protein Properties |
Length: 232aa MW: 26230.3 Da PI: 5.3651 |
Description |
WOX family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm.model.supercontig_6.368 | genome | ASGPB | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 66.7 | 3.1e-21 | 102 | 162 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
r+R+t+t+ ql++Le+ F + n +ps++++++++++l +++e++V++WFqNrRa+ k+
evm.model.supercontig_6.368 102 RQRWTPTPIQLQILERIFDQgNGTPSKQKIKDITSELsqhgQISETNVYNWFQNRRARSKR 162
89*****************99**************************************97 PP
|
2 | Wus_type_Homeobox | 101.7 | 5.2e-33 | 101 | 164 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
ar+RWtPtp Q++iLe+++++G tP+k++i++it+eL+++G+i+++NV++WFQNr+aR+++kq
evm.model.supercontig_6.368 101 ARQRWTPTPIQLQILERIFDQGNGTPSKQKIKDITSELSQHGQISETNVYNWFQNRRARSKRKQ 164
789***********************************************************97 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 232 aa
Download sequence Send
to blast |
MEWDNQPPQQ QQQQENQANQ RDCLGVNMNA NVNGNGVMYV KVMTDEQLET LRKQIAMYAS 60 ICEQLVEMHK NLTAQQDLAG GRLGNLYCDP LMTSGGHKMT ARQRWTPTPI QLQILERIFD 120 QGNGTPSKQK IKDITSELSQ HGQISETNVY NWFQNRRARS KRKQLVAPSN NAESEVETEV 180 ESPNEKKTKP EDLHSQLNSG PRAEDLCFQS PEITSELHFL GALTNPSEYT I*
|
Nucleic Localization
Signal ? help
Back to Top |
 |
No. |
Start |
End |
Sequence |
1 | 155 | 163 | RRARSKRKQ |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription factor which may be involved in developmental processes. {ECO:0000250}. |