 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
evm.model.supercontig_6.244 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
| Family |
WOX |
| Protein Properties |
Length: 313aa MW: 35025.1 Da PI: 6.4481 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_6.244 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 61.1 | 1.8e-19 | 28 | 89 | 2 | 57 |
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
++R+t+t++q+++L++l+++ r p+a+++++++++l +++ ++V++WFqN++a+e++
evm.model.supercontig_6.244 28 STRWTPTSDQIRILKDLYYNsgVRSPTADQIQRISARLrqygKIEGKNVFYWFQNHKARERQ 89
58*****************8789*************************************97 PP
|
| 2 | Wus_type_Homeobox | 114.6 | 4.9e-37 | 27 | 91 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
++tRWtPt++Qi+iL++ly+ sG+r+P++++iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+
evm.model.supercontig_6.244 27 SSTRWTPTSDQIRILKDLYYnSGVRSPTADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKK 91
789***************9779*****************************************96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 313 aa
Download sequence Send
to blast |
MEAHQQLNED SGGNKTGGGG NFLCRQSSTR WTPTSDQIRI LKDLYYNSGV RSPTADQIQR 60
ISARLRQYGK IEGKNVFYWF QNHKARERQK KRFTNSSNTT MSSEHVLLPM QRPSLPHSQA 120
HNNGVRKPNI NDQDSLHHKF SNTSYSSGIP ASAGVLTAPG AQMGNYAYGS VTMENRFRDC 180
SISPTGSSVA SGNGGPLNHH WVSIDHYSTS YNFFEKRKSV LTETIEEEEE EEEEDEQEEE 240
GGSSYYQEKE TLPLFPMHGE DHINGGFCRP SPSTGGYYRG WYRPDDGNYY GGSHASLELS 300
LNTYTGRSPD PL*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that plays a central role during developmental processes such as early embryogenesis and flowering, probably by regulating expression of specific genes. Required to specify stem cell identity in meristems, such as shoot apical meristem (SAM). Acts in parallel with HAM. {ECO:0000269|PubMed:12208843}. |
