 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
evm.model.supercontig_57.21 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
| Family |
WRKY |
| Protein Properties |
Length: 491aa MW: 53118.5 Da PI: 7.2774 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_57.21 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 98 | 5.9e-31 | 245 | 303 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+a+d++++++tYeg+Hnh+
evm.model.supercontig_57.21 245 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCADDKSILITTYEGNHNHP 303
7*********************************************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 491 aa
Download sequence Send
to blast |
MDNNQLERRE FTFLHSSGDF LGQISGVPDD HKRPPVKEMD FFSTSNQPPD QHTNIGSSSS 60
GVNIGLNLLT SGCRISRIEN DDRPNSELSS LQKELERLHE ENRKLRSTLD QITKKYSELQ 120
NQLVMTIQTQ GQGGRREQVL VQKGVSSPIK PGQELTEPRP LDVNEASVSD DKTQDLSNTM 180
EVVSKEREMN VVSGKQDGGD QTSQSWGSPK SPKSDQNKNE DQIPEAPFRK ARVSVRARSE 240
APMISDGCQW RKYGQKMAKG NPCPRAYYRC TMAVGCPVRK QVQRCADDKS ILITTYEGNH 300
NHPLPPAATA MASTTSAAAA MLLSGSTSTK ESLPTSAFLS SVPYASTMAT LSASAPFPTI 360
TLDLTQTPNP MHLLRSQTSF PLPLHGSPQL LGHPMFVAPH KFPAMPPLQL AQRPPSMVET 420
VTAAIASDPN FTAALAAAIS SIIGSNPRSN DANNGSNNVT DENINVTPNG VPGLPGSPQL 480
QQSCTTFSTN *
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
