 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
evm.model.supercontig_55.155 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
| Family |
ERF |
| Protein Properties |
Length: 218aa MW: 24358.9 Da PI: 5.4302 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_55.155 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 63.3 | 5.1e-20 | 92 | 142 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
++y+GVr ++ +g+W+Ae rdp+ r +r++lg+f+t+eeAa+a+++a+ +++g
evm.model.supercontig_55.155 92 KKYRGVRHRP-WGKWAAETRDPR----RgQRVWLGTFDTPEEAARAYDRAAIEFRG 142
59*****888.*******99983....46************************998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 218 aa
Download sequence Send
to blast |
MAHCPKPGPE RKRNRLPTPS ATRQLTRDTE NQIIVSALLH VISGNATHDS SMQRDPPDDI 60
VALPLDASTS FDPVLHTAGT DSCQQEEEDQ KKKYRGVRHR PWGKWAAETR DPRRGQRVWL 120
GTFDTPEEAA RAYDRAAIEF RGFKAKINFP FADYSQEQQL PARAEPELQR AVSVEAAGTR 180
EGESSSRQGV KDEDDDFGLG AIFSEEVIRK LMEETGQ*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5wx9_A | 1e-21 | 93 | 150 | 14 | 72 | Ethylene-responsive transcription factor ERF096 |
