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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
evm.model.supercontig_52.101 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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| Family |
bZIP |
| Protein Properties |
Length: 458aa MW: 49199.7 Da PI: 5.8822 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_52.101 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 49.5 | 9.4e-16 | 230 | 285 | 3 | 58 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58
++kr+rr+ +NRe+ArrsR+RK++ i eLe+ v +L e ++L k+l+ ++ ++++
evm.model.supercontig_52.101 230 DVKRARRMLSNRESARRSRRRKQEHINELETQVGQLRVEHSSLLKRLSDMNHKYDE 285
78******************************************999988887776 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0002240 | Biological Process | response to molecule of oomycetes origin |
| GO:0009626 | Biological Process | plant-type hypersensitive response |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:2000693 | Biological Process | positive regulation of seed maturation |
| GO:0005634 | Cellular Component | nucleus |
| GO:0005737 | Cellular Component | cytoplasm |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0046982 | Molecular Function | protein heterodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 458 aa
Download sequence Send
to blast |
MNTVFSVEDF SDSFWSAPDL AVAAAEIMNR SQSEWALERF FEEMSTSAPT NAIASSSLQS 60
QPSISTAERA HDNDVVEIGK PADHDNHNRS SPSGPSLTAR VDSEEYRAFL KNKLDLACAA 120
VALRASSVKP EDLGTQTENQ QKEAAKQPVP IQSGSQAQDY DTVPKDLTAV CSSVVQSEPG 180
ASPISAPALS ATQPKLVQAR QATSGSSRED SDEDEIEGDM GTTENTDPAD VKRARRMLSN 240
RESARRSRRR KQEHINELET QVGQLRVEHS SLLKRLSDMN HKYDEAAVDN RILKADIETL 300
RAKVKMAEET VKRVTGINPL FLAKSNIPSA AMPFVSNPMD TSLVGAVARQ PNPNQFLNQP 360
VPSIAAGTIP HQRLDNSFTG SALVAPGVNP QSDFRGNNIT ETAPFRLAAA AGPMQKQIGP 420
SASGVQKHVC PGVNPAEAMA GWNSGLPHAA TKNNQKC*
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| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 244 | 251 | RRSRRRKQ |
| 2 | 246 | 251 | SRRRKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that binds to the 5'-ACGT-3' box, especially present in G-box-like motif (5'-CCACGTGGCC-3'), ABRE elements, of seed storage protein (SSP) encoding gene promoters (e.g. At2S and CRU3) and promotes their expression in seeds when in complex with ABI3 and BZIP53. {ECO:0000269|PubMed:12657652, ECO:0000269|PubMed:19261733, ECO:0000269|PubMed:19531597}. |
| Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis.
Plant Physiol., 2017. 175(2): p. 628-640
[PMID:28864470] - Jain P, et al.
A-ZIP53, a dominant negative reveals the molecular mechanism of heterodimerization between bZIP53, bZIP10 and bZIP25 involved in Arabidopsis seed maturation.
Sci Rep, 2017. 7(1): p. 14343
[PMID:29084982] - Pedrotti L, et al.
Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
Plant Cell, 2018. 30(2): p. 495-509
[PMID:29348240]
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