PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica

Family

bZIP

Protein Properties

Length: 350aa MW: 39481.4 Da PI: 7.0275

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.supercontig_49.112	genome	ASGPB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.8	3.2e-10	63	103	3	40
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLea 40 +k +rr+++NReAAr+sR+RKka++++Le+ k ++Le+ evm.model.supercontig_49.112 63 NDKIQRRLAQNREAARKSRLRKKAYVQQLETsrlKLAQLEQ 103 6899**************************83333444444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.8E-5	61	132	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.6E-7	63	102	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.197	63	107	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	6.51E-7	64	107	No hit	No description
CDD	cd14708	6.81E-21	65	117	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.1E-7	66	108	No hit	No description
PROSITE pattern	PS00036	0	68	83	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	1.1E-28	151	226	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0042742	Biological Process	defense response to bacterium
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence Send to blast
MGIYEPFHSM STWANNFKDN DSPNTGSSTV VQMDARLDNK SSEYVSPEPG EPSRNDHEAN 60 RANDKIQRRL AQNREAARKS RLRKKAYVQQ LETSRLKLAQ LEQELERARQ QGLYIGGISD 120 TNYLGMSATV NSGIAAFEME YVHWVDEQHR QISELRNALQ AHITDIELRI LVKSGLNHYS 180 NLFRMKADAA KVDVFYLISG MWRTSTERFF QWIGGFRPSE LLNVVTPQLE PLTDQQIVDI 240 CNLRQSSQQA EDALSQGVDK LQQTLAQCMA AEPGGTGNYG SQMAAAMENL EALEGFVNQA 300 DHLRQQTLQH MSRVLTIRQA ARGLLALGEY FHRLRALSSL WAARPREPA*

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence Send to blast

MGIYEPFHSM STWANNFKDN DSPNTGSSTV VQMDARLDNK SSEYVSPEPG EPSRNDHEAN  60
RANDKIQRRL AQNREAARKS RLRKKAYVQQ LETSRLKLAQ LEQELERARQ QGLYIGGISD  120
TNYLGMSATV NSGIAAFEME YVHWVDEQHR QISELRNALQ AHITDIELRI LVKSGLNHYS  180
NLFRMKADAA KVDVFYLISG MWRTSTERFF QWIGGFRPSE LLNVVTPQLE PLTDQQIVDI  240
CNLRQSSQQA EDALSQGVDK LQQTLAQCMA AEPGGTGNYG SQMAAAMENL EALEGFVNQA  300
DHLRQQTLQH MSRVLTIRQA ARGLLALGEY FHRLRALSSL WAARPREPA*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269\|PubMed:12953119}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00247	DAP	Transfer from AT1G77920	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	evm.model.supercontig_49.112

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	-	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021898560.1	0.0	transcription factor TGA3
Refseq	XP_021898562.1	0.0	transcription factor TGA3
Refseq	XP_021898563.1	0.0	transcription factor TGA3
Refseq	XP_021898564.1	0.0	transcription factor TGA3
Swissprot	Q93ZE2	1e-169	TGA7_ARATH; Transcription factor TGA7
TrEMBL	A0A061FFL9	0.0	A0A061FFL9_THECC; BZIP transcription factor family protein
STRING	evm.model.supercontig_49.112	0.0	(Carica papaya)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM3061	27	66
Representative plant	OGRP2679	11	32

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77920.1	1e-150	bZIP family protein

Link Out ? help Back to Top
Phytozome	evm.model.supercontig_49.112

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444]