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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm.model.supercontig_46.14 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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Family |
YABBY |
Protein Properties |
Length: 219aa MW: 24265.6 Da PI: 8.7711 |
Description |
YABBY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm.model.supercontig_46.14 | genome | ASGPB | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | YABBY | 204.6 | 3.8e-63 | 6 | 192 | 4 | 170 |
YABBY 4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee............... 70
+ ++eq+Cy+ CnfCn +lavsvP +slf +vtvrCGhCt+l svn+a a q l+ ++ ++++
evm.model.supercontig_46.14 6 DVAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDV-QRAVGFCghsctrasgpcpdps 86
5689**********************************************999998884.5544433457889999999997 PP
YABBY 71 .....lleelkveeenlksnvekeesastsvssekl..senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnP 145
+++ + + + + ++e +s++ s +k+ + ++++++ v+rPPekrqrvPsayn+fikeeiqrika+nP
evm.model.supercontig_46.14 87 qqaraSSANKAPKYASPEPYRIHEWGSSSKCS-NKMsmRSPPNHKAAEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNP 167
65543233333333333334444433333333.3441244456666666779****************************** PP
YABBY 146 dishreafsaaaknWahfPkihfgl 170
dishreafs+aaknWahfP+ihfgl
evm.model.supercontig_46.14 168 DISHREAFSTAAKNWAHFPHIHFGL 192
***********************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009944 | Biological Process | polarity specification of adaxial/abaxial axis |
GO:1902183 | Biological Process | regulation of shoot apical meristem development |
GO:2000024 | Biological Process | regulation of leaf development |
Sequence ? help Back to Top |
Protein Sequence Length: 219 aa
Download sequence Send
to blast |
MSSCIDVAPE QLCYIPCNFC NIVLAVSVPC SSLFDIVTVR CGHCTNLWSV NMAAAFQSLS 60 WQDVQRAVGF CGHSCTRASG PCPDPSQQAR ASSANKAPKY ASPEPYRIHE WGSSSKCSNK 120 MSMRSPPNHK AAEERVVNRP PEKRQRVPSA YNQFIKEEIQ RIKANNPDIS HREAFSTAAK 180 NWAHFPHIHF GLMLESNNQA KADGTHDKHL MQRAALLK*
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Functional Description ? help
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Source |
Description |
UniProt | Promotes adaxial cell identity. Regulates the initiation of embryonic shoot apical meristem (SAM) development. {ECO:0000269|PubMed:19837869}. |