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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
evm.model.supercontig_37.28 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
| Family |
NAC |
| Protein Properties |
Length: 277aa MW: 31698 Da PI: 7.6327 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_37.28 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 164.1 | 5e-51 | 8 | 132 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgy 82
lppGfrFhPtd+elv++yL++k+++++l + +i+e+d+yk++Pw+Lp + +ekewyfFs+rd+ky++g+r+nra+ +gy
evm.model.supercontig_37.28 8 LPPGFRFHPTDDELVNHYLCRKCANQPLAV-PIIAEIDLYKFDPWQLPGVALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGY 88
79*************************999.88***************6555689*************************** PP
NAM 83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
Wkatg dk++ + ++ g+kk Lvfy g+ap+g kt+W+mheyrl
evm.model.supercontig_37.28 89 WKATGADKPIGK--PNTLGIKKALVFYAGKAPRGIKTNWIMHEYRL 132
**********98..6789**************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 277 aa
Download sequence Send
to blast |
MKGGEIELPP GFRFHPTDDE LVNHYLCRKC ANQPLAVPII AEIDLYKFDP WQLPGVALYG 60
EKEWYFFSPR DRKYPNGSRP NRAAGTGYWK ATGADKPIGK PNTLGIKKAL VFYAGKAPRG 120
IKTNWIMHEY RLANVDRSAG KRNNLRLDDW VLCRIYNKKG RIEKHDSLSY PEAVEQKPNI 180
LGSVHNMVRP VDHMEASDSI PRLHTESSSS DQVVSPEMRC EREVQSHPKW EDLGSLDFQF 240
NYLDGFQDDP FGSQVNFPVD QISPFQDMFM LLHKPF*
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| Publications
? help Back to Top |
- Florentin A,Damri M,Grafi G
Stress induces plant somatic cells to acquire some features of stem cells accompanied by selective chromatin reorganization.
Dev. Dyn., 2013. 242(10): p. 1121-33
[PMID:23798027] - Jensen MK, et al.
ATAF1 transcription factor directly regulates abscisic acid biosynthetic gene NCED3 in Arabidopsis thaliana.
FEBS Open Bio, 2013. 3: p. 321-7
[PMID:23951554] - Wang YX
Characterization of a novel Medicago sativa NAC transcription factor gene involved in response to drought stress.
Mol. Biol. Rep., 2013. 40(11): p. 6451-8
[PMID:24057250] - Yang X, et al.
Overexpression of a Miscanthus lutarioriparius NAC gene MlNAC5 confers enhanced drought and cold tolerance in Arabidopsis.
Plant Cell Rep., 2015. 34(6): p. 943-58
[PMID:25666276] - Du Q,Wang H
The role of HD-ZIP III transcription factors and miR165/166 in vascular development and secondary cell wall formation.
Plant Signal Behav, 2015. 10(10): p. e1078955
[PMID:26340415] - Takasaki H, et al.
SNAC-As, stress-responsive NAC transcription factors, mediate ABA-inducible leaf senescence.
Plant J., 2015. 84(6): p. 1114-23
[PMID:26518251] - Liu Y,Sun J,Wu Y
Arabidopsis ATAF1 enhances the tolerance to salt stress and ABA in transgenic rice.
J. Plant Res., 2016. 129(5): p. 955-962
[PMID:27216423] - Ghandchi FP,Caetano-Anolles G,Clough SJ,Ort DR
Investigating the Control of Chlorophyll Degradation by Genomic Correlation Mining.
PLoS ONE, 2016. 11(9): p. e0162327
[PMID:27618630] - Zhao J,Missihoun TD,Bartels D
The ATAF1 transcription factor is a key regulator of aldehyde dehydrogenase 7B4 (ALDH7B4) gene expression in Arabidopsis thaliana.
Planta, 2018. 248(4): p. 1017-1027
[PMID:30027414]
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