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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
evm.model.supercontig_36.149 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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| Family |
C2H2 |
| Protein Properties |
Length: 289aa MW: 32751.4 Da PI: 8.0725 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_36.149 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 13.5 | 0.00022 | 107 | 123 | 1 | 17 |
EEETTTTEEESSHHHHH CS
zf-C2H2 1 ykCpdCgksFsrksnLk 17
++C+ C k+F+r nL+
evm.model.supercontig_36.149 107 FSCHVCFKTFNRYNNLQ 123
89************998 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 289 aa
Download sequence Send
to blast |
MEPLDISCSF LAASSTKPVI EPLDLFPTLD LFGSQEKKHH ENPPLQEYNS NADEEEDVTV 60
ALHIGLPDHC FSEQTTINTD SKSKNYTAAS QYWIPTAEQI LIGFTHFSCH VCFKTFNRYN 120
NLQVCMHYDI QLLHLYICIY NGMINGMQMH MWGHGSQYRK GPDSLKGSQP RAMLGIPCYC 180
CAEGCKNNIE HQRAKPLKDF RTLQTHYKRK HGLKSFMCRK CGKLLAVKGD WRTHEKNCGK 240
RWPCVCGSDF KHKRSLKDHI KAFGSGHAPF PASTSFESLE DTASSLLL*
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| Functional Description ? help
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| Source |
Description |
| UniProt | May act as a transcriptional regulator involved in the differentiation of young endothelium. Altered differentiation results in incompetence for pigments synthesis and the lack of condensed tannins in the seed coat (PubMed:21477081). Plays a role in the regulatory network controlling flavonoid accumulation in endothelium cells during seed development (PubMed:21477081). {ECO:0000269|PubMed:11782451, ECO:0000269|PubMed:21477081}. |
