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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.supercontig_34.221 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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Family | bZIP | ||||||||
Protein Properties | Length: 242aa MW: 26736.2 Da PI: 9.0397 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 42.2 | 1.7e-13 | 189 | 232 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r rrk+kNRe+A rsR+RK+a+ eL kv Le+eN +Lkke evm.model.supercontig_34.221 189 RRLRRKIKNRESAARSRARKQAYHNELVSKVSHLEEENIRLKKE 232 5889**************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.1E-5 | 184 | 236 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.783 | 187 | 232 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.3E-11 | 189 | 232 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.56E-10 | 189 | 232 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 9.3E-13 | 189 | 232 | No hit | No description |
CDD | cd14707 | 1.74E-17 | 189 | 238 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 192 | 207 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence Send to blast |
MGSQSNGLQS HLHPSSLVRQ NSWYSLTLNE VEDQLGNLGK PLGSMNLDEL LKNVWTTEAT 60 QSMGIEITSP ASSLQRQASL SLARALSGKT VDQVWKEIQQ GQKKRYGDDL VGREPILGEV 120 TLEDFLVQAG LFAEASLSPS MDLDSVDAAI KQSFPQQTVL SPAPITTLLG TATPGRKRDQ 180 EAIERSIERR LRRKIKNRES AARSRARKQA YHNELVSKVS HLEEENIRLK KEKFDSCSIP 240 G* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | evm.model.supercontig_34.221 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021901007.1 | 1e-169 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 | ||||
Refseq | XP_021901008.1 | 1e-169 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 | ||||
Refseq | XP_021901010.1 | 1e-169 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X3 | ||||
Swissprot | Q9LES3 | 6e-56 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | A0A2H5PEP7 | 1e-119 | A0A2H5PEP7_CITUN; Uncharacterized protein | ||||
TrEMBL | V4U6F2 | 1e-119 | V4U6F2_9ROSI; Uncharacterized protein | ||||
STRING | evm.model.supercontig_34.221 | 1e-176 | (Carica papaya) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM16714 | 10 | 12 | Representative plant | OGRP540 | 15 | 80 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56850.1 | 6e-49 | ABA-responsive element binding protein 3 |
Link Out ? help Back to Top | |
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Phytozome | evm.model.supercontig_34.221 |
Publications ? help Back to Top | |||
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